Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2009 ATGGGTGCGTGCTGGAGCAACCGGATCAAGGCCGTGAGTCCTTCAAGTACAGGATTTATTTCAAGAAGTGTCAGCAGGGATGGCTGTGACACGAGCTCAAACAGCAGGAACTCATCATCCTCCATACCCATAACTCCTCGGAGTGAGGGCGAGATCTTACAGTCTTCCAATTTGAAGAGCTTCAGCTACAGTGAACTTAGAACAGCCACAAGAAATTTTCGGCCGGATAGTATCTTAGGAGAGGGTGGATTTGGTTCAGTTTTTAAGGGGTGGATTGATGAGCACTCCTTTGTTGCCACCAAGCCAGGGGCTGGAATTGTTATTGCTGTGAAGAGACTTAACCAAGATGGTTTCCAGGGTCACAAGGAATGGCTGGCTGAAATCAACTACCTTGGTCAACTGCATCATCCTAATCTTGTTAAACTCATAGGGTACTGCTTGGAGGATGAGCATCGACTTTTAGCATATGAATTTATGTCTAGGGGCAGTGTGGAGAATCATCTGTTCAGAAGAGGATCTCATTTTCAGCCATTCTCTTGGCCTTTGCGAATGAAAATAGCCCTTGGGGCTGCCAAGGGTCTTGCATTTCTCCATAGCACAGAACCTAAAGTCATATACCGTGACTTCAAGACATCAAATATTCTTCTTGATACAGATTATAATGCCAAACTTTCTGACTTTGGGTTGGCCAGAGATGGGCCAACTGGGGACAAGAGTCATGTCTCAACTAGAGTCATGGGTACTCATGGATATGCAGCGCCAGAATATCTTGCAACAGGCCACCTCACTGCCAAGAGTGATGTATATAGTTTTGGTGTAGTTCTCCTGGAAATGTTATCAGGAAGACGAGCAATAGACAAAAACCGGCCATCCGGAGAACATAACCTTGTAGACTGGGCAAAACCTTATTTATCTAATAAACGAAGGTCTTTTCGTGTCATCGATACCCGTCTTCAAGGTCAGCACTCGCTGAGTCAAGCTCAAAGGGCAGCAGCCCTTGCTTTTCAGTGTCTTTCTGCAGAATCTAAATTCAGGCCAAACATGGATGAGGTAGTAAGAGCATTGGAGCAGCTTCAGGAATCAAAGGACACAGCAAAAAGTGCTGACAAGAAAGAGCATCGTGTACAAAGCACCGGTGTTGGTCATCATCCAAAGGGCTTACCCGCATCCCCGAGAAACCGTGCTGGAGCTGTGCCGTCGAATGCTGCTTATCCCAGGCCATCTGCTTCTCCTCTTTTTGCTTAA 1245 0.4627 MGACWSNRIKAVSPSSTGFISRSVSRDGCDTSSNSRNSSSSIPITPRSEGEILQSSNLKSFSYSELRTATRNFRPDSILGEGGFGSVFKGWIDEHSFVATKPGAGIVIAVKRLNQDGFQGHKEWLAEINYLGQLHHPNLVKLIGYCLEDEHRLLAYEFMSRGSVENHLFRRGSHFQPFSWPLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTDYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSGEHNLVDWAKPYLSNKRRSFRVIDTRLQGQHSLSQAQRAAALAFQCLSAESKFRPNMDEVVRALEQLQESKDTAKSADKKEHRVQSTGVGHHPKGLPASPRNRAGAVPSNAAYPRPSASPLFA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2009 414 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Alju11g2009 414 MobiDBLite consensus disorder prediction 361 414 - -
Alju11g2009 414 MobiDBLite consensus disorder prediction 361 379 - -
Alju11g2009 414 Coils Coil 348 371 - -
Alju11g2009 414 MobiDBLite consensus disorder prediction 18 47 - -
Alju11g2009 414 PANTHER OS01G0588500 PROTEIN-RELATED 34 359 - -
Alju11g2009 414 SUPERFAMILY Protein kinase-like (PK-like) 50 360 IPR011009 -
Alju11g2009 414 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Alju11g2009 414 FunFam Probable serine/threonine-protein kinase PBL8 159 374 - -
Alju11g2009 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Alju11g2009 414 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
Alju11g2009 414 Gene3D Transferase(Phosphotransferase) domain 1 159 382 - -
Alju11g2009 414 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g2009 414 CDD STKc_IRAK 79 358 - -
Alju11g2009 414 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2009 Alju-ChrAlju11 41459136 41461797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2009 51 410 Glycoside Hydrolase AT3G07070 47.139 7.95e-109 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju11g2009 Pkinase 3e-44 CL0016