Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2003 ATGACAATGGATCGAGGTCTTTGGGGTTATACGGATTCCAGAAGGGAACAACAGTTGGGAAATCGATCTGTACCAATTCTACAACAGAATGAGAGTCTTGAAAATGCCTTGTTTAATCAAGGAAGGGAATTTCGTTTCCTTCAATCTGATCAGTTACCAAACAACAACACGCCTTCTTCCTCTACCGTGACCAACGAGGGGCATTATTCTCCAGAAGATTGTGATTTTTCTGATGCTGTTTTGAGTTACATAAATCAGATCCTGATGGAAGAAGACATGGAAGATAAGACTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCAGCTGAGAAATCATTCTATGAAGCTCTGGGTCAAAAGTATCCACCTTCACCTGCACAAAATCATCCAAGCCTTTTGATCAATGAAAATGATGGGGTCATGGGACATAATAATACTTTCCCCAGAAATTACAGTGATTTTCACAGTAATAACTATGGTAATTTCAATGGAACTTTCGTTCGTCAGTCCTTGTTTCAAAATCCTAATGAGTTTCCCTCGCAAATTATCCGAGGCAATGGCACTTCTCAGTCATCTTACAGCTCTTCTAGCAGTGTTGTAAGTGGTTTAGAAGGGCCTGTGGATTCTCCAAGCACTAACAGTATTCTTCAGGTTCCAGATCTGAACAGTGAGAGCCAATCCATTTCGCAATTTAAAAAAGGCGTTGAAGAGGCTAGTAGGTTTCTTCCAGATGGAAACAAGCTTCTTGCTCGCTTAGGTGTGTCTAATTTATCACGGGAAGAACCAAAAGCGATGACTCGTGAAATGTCAGCAAAGGTGGAGAAAGATGAAGAGTATGATTTTTTTGGCGGGTCAAAGGTGAGAAAGCAGCTACACAGGGGAGAGGAAGACAATGAAGAAAAGAGTAGCAAACAAGCAGCAGTTTATACAGAACCGACGCTACGTTCTGTGATGTTTGATTTAATGCTTCTTTATACTGATGGGGAAGGTAAGAACCATTACATGGCTCGTCGTGAAGCGTTGCAGAACAAGACCATCAAGGCGGTGATGCCAAATGGTCAAGCGGCCAAAGCTTCAAACACCAGTAAGGGGCGTGGGAAGAAACAAAATGGGAGAAACTCAGTGGTGGATTTGAGAACACTTCTGGTTCTGTGTGCACAAGCTGTTGCAGCAGATGATCATAAGAATGCACATGAGTTGATAAAGCAGATCAGGCAGCACTCAAATCCTTTTGGGGATGGGAATCAAAGGTTGGCACATGTGTTTGCTGATGGACTCGATGCGCGCTTGGCCGGCACCGGTAGCCAGATTTATAAAGGACTCATCAGTAAGAAAAGGTCAGCAGCTGATTTACTGAAAGCCTATCATCTCTACCTAACTGCTTGCCCTTTTAGGAAGATATCTAATTTTTTCTCAAATGTCACAATAAGGACAGCTGCCGAGAACTCAACAAGGATCCATATTATAGATTTCGGTATTCTTTATGGTTTCCAGTGGCCGACTTTCATACAGAGACTGGCAATGAGAACAGGAGGAAAACCACCGAAAATTCGAATCACGGGAGTAGACTTCCCACAACCTGGTTTTAGGCCAGCTGAGGTAATCGAAGAAACAGGAAGACGGCTAGCAGATTATGCAAAAGCTTTCAATGTTCCATTTGAGTATGCTGCCATAGCGAAGAAATGGGAAACCATTCAGCTTGAGGAGCTCAAGATCGATAGGGACGAGTTCCTGGTTGTGAACTGTATATACAGAGCAAAGAACTTGCTTGATGAATCTGTAACAGTGGAGAGTCCCAGGAATGCTTTCCTTAATCTGGTTAGAAAGATCAATCCTGATGTGTTCATTCACGGGATTGTCAACGGGGCATTCAACGCGCCTTTCTTCGTGACAAGGTTCAGGGAAGCATTGTTTCACTACTCATCACTGTTTGATATGCTGGAGACCATCGTGCCCCGAGAGGACTGGGAGCGAATGCTGATCGAGAAGGAGATATTTGGGAGAGAAGCGTTGAACGTGATAGCGTGCGAGGGATGTGAGAGATCAGAGAGGCCGGAGACGTATAAGCAGTGGCAAGCTCGGATTCTAAGAGCAGGGTTTACACAGATTCCGTTCTCTAGAGATTTAGTACAAAGGGCAATGCAGAAGGTAAGGGGAAGCTACCACAAGGATTTTCTGATTGATGAAGACAGCAAGTTGTTGTTGCAAGGTTGGAAGGGAAGAATCATATATGCACTCTCTTGTTGGAGACCTTCCTGA 2259 0.4369 MTMDRGLWGYTDSRREQQLGNRSVPILQQNESLENALFNQGREFRFLQSDQLPNNNTPSSSTVTNEGHYSPEDCDFSDAVLSYINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEALGQKYPPSPAQNHPSLLINENDGVMGHNNTFPRNYSDFHSNNYGNFNGTFVRQSLFQNPNEFPSQIIRGNGTSQSSYSSSSSVVSGLEGPVDSPSTNSILQVPDLNSESQSISQFKKGVEEASRFLPDGNKLLARLGVSNLSREEPKAMTREMSAKVEKDEEYDFFGGSKVRKQLHRGEEDNEEKSSKQAAVYTEPTLRSVMFDLMLLYTDGEGKNHYMARREALQNKTIKAVMPNGQAAKASNTSKGRGKKQNGRNSVVDLRTLLVLCAQAVAADDHKNAHELIKQIRQHSNPFGDGNQRLAHVFADGLDARLAGTGSQIYKGLISKKRSAADLLKAYHLYLTACPFRKISNFFSNVTIRTAAENSTRIHIIDFGILYGFQWPTFIQRLAMRTGGKPPKIRITGVDFPQPGFRPAEVIEETGRRLADYAKAFNVPFEYAAIAKKWETIQLEELKIDRDEFLVVNCIYRAKNLLDESVTVESPRNAFLNLVRKINPDVFIHGIVNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERSERPETYKQWQARILRAGFTQIPFSRDLVQRAMQKVRGSYHKDFLIDEDSKLLLQGWKGRIIYALSCWRPS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2003 752 MobiDBLite consensus disorder prediction 354 371 - -
Alju11g2003 752 MobiDBLite consensus disorder prediction 351 371 - -
Alju11g2003 752 ProSiteProfiles GRAS family profile. 369 750 IPR005202 -
Alju11g2003 752 Pfam GRAS domain family 378 750 IPR005202 -
Alju11g2003 752 MobiDBLite consensus disorder prediction 49 68 - -
Alju11g2003 752 MobiDBLite consensus disorder prediction 49 69 - -
Alju11g2003 752 MobiDBLite consensus disorder prediction 178 221 - -
Alju11g2003 752 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 297 744 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2003 Alju-ChrAlju11 41382671 41384929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2003 72 751 GRAS Transcription Factor Family AT2G37650 52.677 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju11g2003 GRAS 2.1e-115 CL0063