Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2000 ATGGAGGAAGCTTTAAGGTCATCATCATATTGGTCAGAAGAGGAGGAGCTATTGAGAGAGCTTTTAGAGGAAGGATCTGATAATAATGCTGTGGTAACAGAAGTTGATGATCAGAATTACTATATGAGAAAATCAAGTGAGGAACAAGCCATTATTAATAATAGGTTCATCTCCAACATCTACTCAGGACCTACCATTTCTGATATTGAGAATGCCTTATCTGTCACATCCCACCAAAGATACCAACCCTCCTCACCACCCAGCAGAGTTTGCATAATGGGAAGAGGTTTGAATTTGAGCAGGAGTGAGCATAATTATAGCCTGAAAATCAAGTGTTATGGCAATGGATTGAGTGATGATGGATATAAATGGAGGAAGTATGGACAGAAATCCATTAAGAACAGCCCAAATCCTAGGAGCTACTATAAGTGCACAAACCCAGGGTGTAATGCCAAGAAGCAAGTGGAGAGATCCAGTGAAGAGCCAGACACTGTTATTGTCACCTATGAAGGGCTCCATCTTCACTTTGCTTACCCATATTTTATAATGGGCCAACCACATCATCAAGCCCATCCACCATCGAAGAAGTCCAGGCCTATCTATTCACAAGCCCAACACCATGATGAAGCCCAAGAATGTTCACAAGTTTATATGGTCCAGAAGCCCAGACCAGCGGATGTTACCTTGGCCTCTACGGAAAACATGGGCCCACAAGGATTGCTTGAAGACATGGTGCCATGGATGATTCGGAACCCTAGTATCAGTAATCGCTCAAATTTTTGCTGCTCTTCTTTATAA 798 0.4248 MEEALRSSSYWSEEEELLRELLEEGSDNNAVVTEVDDQNYYMRKSSEEQAIINNRFISNIYSGPTISDIENALSVTSHQRYQPSSPPSRVCIMGRGLNLSRSEHNYSLKIKCYGNGLSDDGYKWRKYGQKSIKNSPNPRSYYKCTNPGCNAKKQVERSSEEPDTVIVTYEGLHLHFAYPYFIMGQPHHQAHPPSKKSRPIYSQAQHHDEAQECSQVYMVQKPRPADVTLASTENMGPQGLLEDMVPWMIRNPSISNRSNFCCSSL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2000 265 SUPERFAMILY WRKY DNA-binding domain 116 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g2000 265 Gene3D WRKY domain 109 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g2000 265 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g2000 265 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 204 IPR044810 GO:0003700
Alju11g2000 265 Pfam WRKY DNA -binding domain 119 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g2000 265 FunFam WRKY transcription factor 105 179 - -
Alju11g2000 265 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2000 Alju-ChrAlju11 41343325 41346436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2000 40 251 WRKY Transcription Factor Family AT5G43290 41.423 5.96e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju11g2000 WRKY 5.1e-26 CL0274