Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1977 ATGGAAGAAGAAGGTCAATGTTGGATTTGGACAAAGAGAAAGCACTCATCTTTGAGCTCTTACAATAATAGCACTCTTTCTTCGCCAACGACTCACAAGTTCGGCTACGGTGATTCATGGGAAGAACAAGCTTTTGCAGAAGATGAGCGCCTTGGTGGCTGTATTTGGCCTCCAAGATCATATTCTTGCAGCTTTTGTAACAGAGAGTTCAGGTCAGCTCAAGCTCTTGGTGGCCACATGAATGTTCACAGAAGAGATAGAGCTAGGCTAAAGCAACCACCAAGTCCACACAAACAAGATGAAACCACTACTCTTGATCATCAAAATTCTTTCTCATCTTCTTGTCTGCCTTGTTCCAACGCTAACCCTAATTCGGATCTTCTTCTTGAGGCTAAATTAGCCCCTCCTCCATCTTTGATTATTCAAGAGAATTCTTCCGCACCGTACGATTCTTGTATTTCGTGGTCAAACTTTGCTAAACAAAGATTGTATTCTAGAAAGGTCGATCTTATTGGAACTGAAGATAAGAAGATGTCCAAGATAATAGATACTGATGATTGTTATGAGGAAGAAGCTGGTATTACGAGCTACAAGAGGAGAAGAATAAAAGATGATTCATCATCAATTATTCCAGTTGATAATAGGAATGATCATATGATCAAGTCTCAGATGTTGGAGTTTATTAATCCTAGTTCCATTGTTGAAGACCTAGATCTGGAGCTAAGGCTGGGTCATAGTCCTCCCAAGGTATAG 753 0.4037 MEEEGQCWIWTKRKHSSLSSYNNSTLSSPTTHKFGYGDSWEEQAFAEDERLGGCIWPPRSYSCSFCNREFRSAQALGGHMNVHRRDRARLKQPPSPHKQDETTTLDHQNSFSSSCLPCSNANPNSDLLLEAKLAPPPSLIIQENSSAPYDSCISWSNFAKQRLYSRKVDLIGTEDKKMSKIIDTDDCYEEEAGITSYKRRRIKDDSSSIIPVDNRNDHMIKSQMLEFINPSSIVEDLDLELRLGHSPPKV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1977 250 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Alju11g1977 250 MobiDBLite consensus disorder prediction 82 106 - -
Alju11g1977 250 PANTHER OS07G0101800 PROTEIN 38 247 - -
Alju11g1977 250 SMART c2h2final6 61 83 IPR013087 -
Alju11g1977 250 MobiDBLite consensus disorder prediction 82 104 - -
Alju11g1977 250 Pfam C2H2-type zinc finger 61 85 - -
Alju11g1977 250 Gene3D Classic Zinc Finger 58 115 - -
Alju11g1977 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Alju11g1977 250 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1977 Alju-ChrAlju11 41139522 41140274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1977 1 250 C2H2 Transcription Factor Family AT5G06070 33.333 3.02e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju11g1977 zf-C2H2_6 6.9e-07 CL0361