Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1921 ATGGATGATCCTCTGCTCCCATATGTCAGTCCCAGGAAGAAGCCTCCGCCGCCACCTCCGCCGCTATGCCCTTTACCGGAGCACGACGAGGTCGTTGTTCCTCTTACCCCTTCGGCGATTAAGGACCGTCTTATCTTTGGTCCTTCTTCCCCAACAGGTACTACCCCCTTGCTTGAGGCTTTAACACTTACCCTTAACTCCCCAAAACCCTCCTCTTCTTCAGAGGACCCTCAAGAGACACAACCCCAACAGTCTTGGCTTACTGACCCCAATTACCCAAGTCACAAAACTAATCTTCATCGCTCCAAAACTGCCCCGGCTATTGCGGTAATCAAAGGTGTTCATCACCAGAGTCCTGTTGCTAGACCCCAATTTGGGTCCCAATCGATTGTTCGTCAAGCTGTTATTCTTCTTATATTGTATTTGTCATTGGGGGTGGTTATTTATTGGTTGAATCGTCATCATTTTTCAGCAACTGAGACTCATCCTGTTGTGGACGCTTTATATTTTTGTGTAGTGACTATGTGTACAATAGGCTATGGTGATATTACTCCAAATAGTATAACGACAAAACTGTTTTCCATATTGTTTGTACTGGTGGGTTTTGGGTTTATTGACATATTGCTCAGTGGGATGGTCAGTTATGTTCTTGATTTGCAAGAGAATCACCTGCTCCAAGCGGTGAAGACCAAGGTTGAAATTGAGAAGGATGCCGGATCATATATAATTGATGTGAAGAAAGGGAGAATGAGGATTAGGTTGAAGGTGTCTTTGGCATTGGGGGTTGTCGTCCTTTGTATTGGAATTGGTTTTGGGTTTATGCATTTTGTGGAAGGGCTTGGGTTGTTGGATTCTTTTTATCTTTCAGTTATGTCAGTAACAACTGTTGGGTATGGTGACCATGCGTTCAAGACATTGGCTGGTCGCATCTTTGCTGCAATATGGTTGCTTGTATCAACGCTTGCAGTGGCCCGGGCATTCCTGTATTTGGCCGAAGCAAGAGTGGATAAGCGGCATAGGAAGATGGCAAAGTGGATTCTTGGTCAAGATATGACTGTCTCTGAGTTTCTTGCTGCAGATATAGACAATAATGGCTTTGTGAGTAAATCAGAATATGTTATTTACAAGCTCAAAGAGATGGGGAAAGTTTCCGATAAAGACATTTTGCAGATTAGTGAGAAATTTGATAGAATAGATGTCGGCAACTGCGGAAAAATAACTCTAGCTGATCTTATGGAGGCTCAAAATTGA 1251 0.4365 MDDPLLPYVSPRKKPPPPPPPLCPLPEHDEVVVPLTPSAIKDRLIFGPSSPTGTTPLLEALTLTLNSPKPSSSSEDPQETQPQQSWLTDPNYPSHKTNLHRSKTAPAIAVIKGVHHQSPVARPQFGSQSIVRQAVILLILYLSLGVVIYWLNRHHFSATETHPVVDALYFCVVTMCTIGYGDITPNSITTKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHLLQAVKTKVEIEKDAGSYIIDVKKGRMRIRLKVSLALGVVVLCIGIGFGFMHFVEGLGLLDSFYLSVMSVTTVGYGDHAFKTLAGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRKMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSDKDILQISEKFDRIDVGNCGKITLADLMEAQN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1921 416 SUPERFAMILY Voltage-gated potassium channels 128 216 - -
Alju11g1921 416 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
Alju11g1921 416 Gene3D - 255 327 - -
Alju11g1921 416 FunFam Two-pore potassium channel 3 239 353 - -
Alju11g1921 416 Gene3D - 128 230 - -
Alju11g1921 416 Pfam Ion channel 262 331 IPR013099 -
Alju11g1921 416 Pfam Ion channel 136 216 IPR013099 -
Alju11g1921 416 PRINTS Two pore domain K+ channel signature 173 201 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju11g1921 416 PRINTS Two pore domain K+ channel signature 294 303 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju11g1921 416 FunFam Two-pore potassium channel 5 119 229 - -
Alju11g1921 416 MobiDBLite consensus disorder prediction 9 27 - -
Alju11g1921 416 SUPERFAMILY EF-hand 348 413 IPR011992 -
Alju11g1921 416 Gene3D - 328 416 - -
Alju11g1921 416 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 135 390 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju11g1921 416 MobiDBLite consensus disorder prediction 65 99 - -
Alju11g1921 416 MobiDBLite consensus disorder prediction 1 28 - -
Alju11g1921 416 SUPERFAMILY Voltage-gated potassium channels 246 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1921 Alju-ChrAlju11 40356140 40361490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1921 3 414 Ion Channels AT4G18160 62.818 4.52e-180 507