Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1914 ATGTCGTCAATTAGACAGATTTCCCTTGTAGATTTGGAGCAGGCAAGCCATCGTAGTGACATGAGTGCCGAAGCTAGCATTTGTTTCTCTGATGCTGAAGAGGGTTCTTGCTATTCCCACTTCTATTCAACAAATGGTGGCTCATACGATGACTATAGCTTTGCTTGTGTTTCTGATCCTGAGGTTATTGAGGGTGTTCCTGAGTCTGCAAGAGCTTCTTCTTCTTCTTCTGTCACTGAATGTTCAGTGGAGGTTGAAATTGAAAGTGCGGTTCCTGAAATTAAGGTGCATTTGGATGTTGTAGAGAAAGAGTGTAGGATTTGTCACATGGGTTTGGAAAGTGAAAGCCATGAATCTGGGGTTCCAATTGAGTTGGGTTGTTCCTGTAAGGATGATCTTGCTTCTGCTCATAAACTCTGTGCTGAAACTTGGTTCAAGATGAAAGGGAACAGGACCTGTGAAATCTGTCATTCTGTGGCACGGAATGTATTTGCGGCTATAGAGGAGACGACCGAGAATTTAAGTGACAGCAACAACGCTATCACATTATCAACACTCCCAGCGCCGGCTTCCCCGGAAACTCGAAGATTCTGGCAGGGCCGCGGCTTCCTGAATTTCATGCTTATTTGTATGGTTATAGCATTTGTCATATCATGGGCTTTTCACTTCCATTTTCATTCACCTTAG 687 0.4396 MSSIRQISLVDLEQASHRSDMSAEASICFSDAEEGSCYSHFYSTNGGSYDDYSFACVSDPEVIEGVPESARASSSSSVTECSVEVEIESAVPEIKVHLDVVEKECRICHMGLESESHESGVPIELGCSCKDDLASAHKLCAETWFKMKGNRTCEICHSVARNVFAAIEETTENLSDSNNAITLSTLPAPASPETRRFWQGRGFLNFMLICMVIAFVISWAFHFHFHSP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1914 228 PANTHER ZINC FINGER, RING-CH-TYPE 14 225 - -
Alju11g1914 228 SUPERFAMILY RING/U-box 101 160 - -
Alju11g1914 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 165 IPR013083 -
Alju11g1914 228 SMART ringv_2 104 157 IPR011016 GO:0008270
Alju11g1914 228 ProSiteProfiles Zinc finger RING-CH-type profile. 97 163 IPR011016 GO:0008270
Alju11g1914 228 Pfam RING-variant domain 105 156 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1914 Alju-ChrAlju11 40297824 40300956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1914 76 227 C3H Transcription Factor Family AT5G05830 55.195 2.50e-56 176