Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1898 ATGCTTCAGATTCGGCTTAGTAAGTTACCAGCCTCGGAAGGTTCATCGGGGCTGAGATCCGCACCTGTTGAGACTGCAATTGCATGCCCTGAACATCTAGTCTTGGCTGACCTACCTGTAGCAAAGGGCATCGGTGCAGCCACTGCCACTTCCCTTATTAAGACTGTAGGACGGAGGTCTCGCCGCCAACTTGGCAATAGAGTTCATTTCTGTGTTCGTTGTGATTTTCCTGTAGCTATCTATGGACGATTGGCTGATCGCTTCTGTTTCATAGCCTCTGTTTGGCCAATGGCGCCGCCGCCGGACACACGATCCCATAAATGTCTTGGTGATTTGGAAAATCGTTTGGAGATGTTCCAGACTACTGTACATAGTCGGCTTGACCAAAGCTCCCAAGATATTCATGACCTGAAACAGAAAGGCGAGTAG 429 0.4942 MLQIRLSKLPASEGSSGLRSAPVETAIACPEHLVLADLPVAKGIGAATATSLIKTVGRRSRRQLGNRVHFCVRCDFPVAIYGRLADRFCFIASVWPMAPPPDTRSHKCLGDLENRLEMFQTTVHSRLDQSSQDIHDLKQKGE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1898 142 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 84 IPR040383 GO:0016567|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1898 Alju-ChrAlju11 40135029 40136610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1898 1 84 C2H2 Transcription Factor Family AT5G01160 70.588 1.01e-36 127