Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1882 ATGAACAGGGGAATTGAAGTTTTCTCTCCAGCTTCTTACCTTGAAAACTCCAATTGGTTGTTCCAAGAAAGCAAAGGAACAAAATGGACCCCAGAAGAGAACAAGCGATTTGAAGATGCTTTGGCCTTGTACGACAAAGATGCACCAGATCGTTGGTTGAAAGTTGCAGCTAAAGTTCCAGGGAAGACAGTAGGAGATGTGATTAGGCAGTACAAACAACTTGAAGAAGATGTTAGTGTCATTGAGGCAGGGTTGATTCCAGTCAGTGAGTATGATGATAGCAACAGTTCTTTCACTTTGGAATGGGCCAATAATAATAACCAAGGCTTTGATGATTTCAAGCCATTATATAGTGTTGGTGAGAAAAGAGGTTCTTCCACTCGATCATCTGAGCAGGAAAGGAAAAAAGGAGTGCCATGGACTGAAGAGGAGCACAGGCAATTTCTGATGGGACTGAAGAAGTATGGTAAAGGGGATTGGAGAAACATATCTCGTAATTTTGTGACTACAAGGACACCAACTCAGGTTGCTAGTCATGCTCAGAAGTATTTCATCAGGCAGGTTACAGGAGGCAAGGACAAGAGGAGATCAAGCATCCATGACATCACAATTGTTAACCTCGAAACCAAGTCGTTGTCATCTCCTTCATCAGACGCTCACAGACCTTCTTCTCCTCCCGATCGCTCGGTGAAGGTTGTGAATGATCATCTGCCTAATAAGAATCCGAATTTCCCTACCATGATGGTTAAACAGGAGTATGACTCTCAATTGCCATTTGAGTCCATGCCAATGATTTTCAATTCAGCAAATGGAAACATGTTCATGCCACCACCGTATTTCGGGATTTCTTCAGTTGGATCTGGACCTCAGGAGCAGTGTTTACTCAGAGGTTCTCTCTGA 900 0.4311 MNRGIEVFSPASYLENSNWLFQESKGTKWTPEENKRFEDALALYDKDAPDRWLKVAAKVPGKTVGDVIRQYKQLEEDVSVIEAGLIPVSEYDDSNSSFTLEWANNNNQGFDDFKPLYSVGEKRGSSTRSSEQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQVTGGKDKRRSSIHDITIVNLETKSLSSPSSDAHRPSSPPDRSVKVVNDHLPNKNPNFPTMMVKQEYDSQLPFESMPMIFNSANGNMFMPPPYFGISSVGSGPQEQCLLRGSL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1882 299 MobiDBLite consensus disorder prediction 126 140 - -
Alju11g1882 299 MobiDBLite consensus disorder prediction 210 231 - -
Alju11g1882 299 NCBIfam myb-like DNA-binding domain, SHAQKYF class 135 187 IPR006447 GO:0003677
Alju11g1882 299 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Alju11g1882 299 Gene3D - 21 88 - -
Alju11g1882 299 MobiDBLite consensus disorder prediction 121 140 - -
Alju11g1882 299 FunFam Transcription factor SRM1 21 88 - -
Alju11g1882 299 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 244 IPR043363 -
Alju11g1882 299 Gene3D - 138 188 - -
Alju11g1882 299 SUPERFAMILY Homeodomain-like 133 187 IPR009057 -
Alju11g1882 299 CDD SANT 139 184 IPR001005 -
Alju11g1882 299 Pfam Myb-like DNA-binding domain 139 184 IPR001005 -
Alju11g1882 299 Pfam Myb-like DNA-binding domain 28 74 IPR001005 -
Alju11g1882 299 CDD SANT 28 74 IPR001005 -
Alju11g1882 299 FunFam transcription factor MYB1R1 138 189 - -
Alju11g1882 299 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
Alju11g1882 299 SMART sant 136 186 IPR001005 -
Alju11g1882 299 SMART sant 25 77 IPR001005 -
Alju11g1882 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 188 IPR017930 -
Alju11g1882 299 ProSiteProfiles Myb-like domain profile. 132 184 IPR001005 -
Alju11g1882 299 ProSiteProfiles SANT domain profile. 140 188 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1882 Alju-ChrAlju11 39970907 39972304 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju11g1882 Myb_DNA-binding 2.2e-12 CL0123