Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1881 ATGCCTTCTTCCGCCACCACCATACTCTCCAAATCCACTGTTTACCCTAGCCAGCCGTCCACCGTGAAACCCCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTTTCTTGCCACTACATCCAAAAGGGCATCCTCCTCCCTCCTCCGCCGTTCTCCTTCCCTGATCTCCTTCTCTCTCTTAAGCGCTCTCTCGCGGTCACTCTCTCCGTTTTCCCTCCCCTCGCCGGCCGTCTATTCACAGACTCCGACGGCTATGTCTATATTCAATGCAACGACGCCGGTGTTGACTTCATCCATGCCTCCGCCAAACACCTTGCAACTCACTCCATTGTTTACTCTTCCACTCTCACTGATGTCCCCAATTGCTTCAAGCAGTTCTTCGCCTACAGCAAGACTATCTCCTACTCTGGCCACTCTCTCCCCCTCGTCGCCGTCCAAGTCACCGAGCTCGCTGACGCTGTTTTCATCGGATGCACCGTTAATCATGCCGTTGTTGACGGCACTTCCTTATGGCATTTCTTCAACACCTTCGCTAAGATCTCTAGAGGAGCAAAGATTTACAAATCCCCTTACTTCACTCGTGACACTGTTTTCAACTCCTCCTCCGTGCTCAAAGTCCCGGCCGGCGGCCCTAAAGTCACCTTTGACGACGACCATCCTTTAAGAGAGAGAGTGTTCCATTTCAGCAGGGAAGCAATTCAAAAGCTTAAGCTCAGAGCTAATCACTATGGCGGGAACGGTTTCGCGGATTCTACGGAGAAGCATGTTAACGGCAAGATAACGTCCGTCAAGGCGAATGGGATAGCCCACAAGGGGGAAGAGATTTCGTCGTTTCAATCGTTATCCGCACAGCTATGGCGTTCGGTGACACGTGCGAGGAACTTGGACGCACGCAAAACGTCGACTTTTCGCATGGCGGTGAACTGCCGCAGCCGTCTGGAGCCGAAGATGGACGCTTATTACTTCGGGAACGCGATACAGAGCATCCCGACCGTTGCTGAGGTCGGAGAGATTCTGTCTCAGGATCTACGGTGGTGTGCGGATCTGCTGCACAAAAACGTCGTCGCACATGACGACGCTACGGTGCGACGTGGCGTGGAGGATTGGGAGAAGGCGCCGAGGCTGTTTCCGCTGGGTAACTTCGACGGTGCTTCGATGACCATGGGAAGCTCTCCGCGTTTTCCCATGTACGACAATGACTTTGGGTGGGGCCGACCATTGGCAATTCGTAGCGGGAAGGCTAATAAGTTTGACGGTAAGATCTCTGCGTTTCCAGGGAGAGAAGGAAATGGGAGCGTTGATCTGGAAGTCGTTTTGGCGCCCGAAACGATGGCGGGGCTTGAAAACGACAAGGAGTTCATGCAATACGTAACGGTAACGGTAACGGTGTGA 1392 0.5359 MPSSATTILSKSTVYPSQPSTVKPLKLSVSDLPMLSCHYIQKGILLPPPPFSFPDLLLSLKRSLAVTLSVFPPLAGRLFTDSDGYVYIQCNDAGVDFIHASAKHLATHSIVYSSTLTDVPNCFKQFFAYSKTISYSGHSLPLVAVQVTELADAVFIGCTVNHAVVDGTSLWHFFNTFAKISRGAKIYKSPYFTRDTVFNSSSVLKVPAGGPKVTFDDDHPLRERVFHFSREAIQKLKLRANHYGGNGFADSTEKHVNGKITSVKANGIAHKGEEISSFQSLSAQLWRSVTRARNLDARKTSTFRMAVNCRSRLEPKMDAYYFGNAIQSIPTVAEVGEILSQDLRWCADLLHKNVVAHDDATVRRGVEDWEKAPRLFPLGNFDGASMTMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDKEFMQYVTVTVTV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1881 463 Gene3D - 6 207 IPR023213 -
Alju11g1881 463 Pfam Transferase family 7 454 - -
Alju11g1881 463 Gene3D - 220 454 IPR023213 -
Alju11g1881 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1881 Alju-ChrAlju11 39943629 39945020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1881 60 448 Monolignol Biosynthesis Gene Families AT5G48930 27.764 1.81e-38 143