Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1865 ATGAGCTCGACATTTAGCTCTGCAACTGTGACCCTTCAAGGAAATGAAACTGATTTTCAAGCTTTGCTTGACTTCAAGAGTCGGATATCCGAAGATCCATATAAAATATTGAGTTCCTGGAACAACTCCATCCATCACTGCAAATGGGTAGGAATCACCTGCAATATCTCCACTGGACGGGTGGTGCAACTGAGCCTTGGACAACATAGATTGACTGGCACTGTTCCACCTTCAATAGGAAACCTCACATTCCTCAGAGTACTTAATCTAAGCATCAACAGCTTCCATGGTGAATTTCCTAAGAAGTGGGATTCTGCTATATCTTCAAACTCTAGACATCACCCTCAATTACTTCACTGGAGCATACCAAAAGAGATGGGCTATTTGTCAGGCTTGACATTTCTTGCACTAAATGGTAATTACCTATCTGGCACAGTTCCTCCTTCTATTTACAACATTTCCTCTATATACTACTTCGCTGTTGCTCAAAACAATCTGCAAGGCAGTATACCACCTGATGTTGGATTAAGTCTTCCTAACCTTGAGACATTTGGTGGGGCAGTCAACAATTTCACCGGAACTATTCCAGTATCATTGGTAAATGCTTCAAGGCTACGACTTGTTGATTTCGCTGAAAATGATCTCACTGGAACACTTCCTAAGAACATAGGAGTTTTAGAAAGTTTATTTTGGCTCAACTTTGATGACAACAGGCTTGTATCGAATGGAAAAGATTATGGTGGCCTAGGTTTTGAAATTACTTCTCTGGTTAATTGCACTGAACTTCAAGTTTTAGGTCTTAGAGGAAATATAAAGGCTTCTTCGTCCCGAAAATCTCTTGCCCTCAAGTTGACAATCCCTCTTGCTAGCACTCTGGTAATTGTCATCCTTCTATCATGCTTTCTGGCATTCTTTTTAACGGTGAAACGAGCAAGAACAAGATCAGAAGCAAGTGCAATCACTTTAAGGAATTTGACGAACTCAGAAATGTCTTACTCAGAGCTGGCTAGATGCACTGGAGGGTTCTCCCAAGAAAACTTGATCGCTCATGTGGGTGACTTCGGACTAGCAACCCTTCTATATGAAGAATCAAGCGACTCTTCCACTTCCAGAGAACAGTCAACAATGTCACGTTTCCTAAAGGGTTCAATCGGGTACATTCCCCCAGAATATGGTATGGGTGGGCAACCTTCAACACTGGGAGATATCTATAGTTATGGGATACTATTAATGGAGATTTTCACAGGAAAGAGACCTACTAATGATGAATTTGAAGGAGGGATGGGAATTCACCATTATGTGGCAAGAGCTTTACCCAATCATGCTATGGAGATTGCTGATCCTTGCTTGCTATCTGAAGAAGAAGATGAAGATGAAGAGATATGTTTGGAGGAGAGAGCAATAAGGAAGGGAAGTGGAAGAGGGAGAGTAATGGAGGATTGCTTGAGTTCGTTGATGCAAGTGGGAGTATCTTTCTCTGCAAATGTGCCGTCGGAGAGGCTGCAGTCTATGACTGTGGTTGTTAGCAAACTCCAAGCAGTCAAGAAATTCTTCGTCCCCTCGTGTAACAATCCTACCTTCACCATTGCTAGAGTTGGATTCAGATCAGATCTACATTTAAAAAGAGATGAACCAAAGTTGTGCAAGTTCCAGGATCCTCCTAGCATTACAAATCCTCAGTGGTTTGAAACCTCACATTCCTCAGAGTACTATCTAAGCATCAACAGCTTCCATGGTGAATTTCCTAAGAAGTGGGATTCTGCTATATCTTCAAACTCTAGACATCACCCTCAATTACTTCACTGGAGGCTTGTATCTAATGGAAAAGATTATGGCGGCCTAAGTTTTGAAATTACTTCTCTGGTTAACTGCACTGAACTTGACATTTTAGGGGGCCTAAAGGGTTCTATAGGGTACATTCCACCAGAGTATGGTACGGGTGGGCAACCTTCAACATTGGGAGATATTTACAGCCATGGGATACTGTTACAGGAGATTTTCACAGGAAAAAGACCTACAAATGATGAATTTGAAGGCGGAATGGGAATCCACCAATATGCTGAAATGGCTTTGCCCAATCATGCCATGGAGATAGCTGATTCTTTTCTGGTATCTGAAGAAAAAGATGAAGATGAAGATAAAGAGATATATTTAGAGAAAGCTATGATGGAGGAATGCTTGGGTTCGTTGATGCAAGTGGGAGTGTCTTGCTCTGCAAATGGGCCGTCGGAGAGGCTGCAGTCTATGACTCTGGTTGTTAACAAACTCCAAACAATCAAGAAATGGTAA 2289 0.4185 MSSTFSSATVTLQGNETDFQALLDFKSRISEDPYKILSSWNNSIHHCKWVGITCNISTGRVVQLSLGQHRLTGTVPPSIGNLTFLRVLNLSINSFHGEFPKKWDSAISSNSRHHPQLLHWSIPKEMGYLSGLTFLALNGNYLSGTVPPSIYNISSIYYFAVAQNNLQGSIPPDVGLSLPNLETFGGAVNNFTGTIPVSLVNASRLRLVDFAENDLTGTLPKNIGVLESLFWLNFDDNRLVSNGKDYGGLGFEITSLVNCTELQVLGLRGNIKASSSRKSLALKLTIPLASTLVIVILLSCFLAFFLTVKRARTRSEASAITLRNLTNSEMSYSELARCTGGFSQENLIAHVGDFGLATLLYEESSDSSTSREQSTMSRFLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLMEIFTGKRPTNDEFEGGMGIHHYVARALPNHAMEIADPCLLSEEEDEDEEICLEERAIRKGSGRGRVMEDCLSSLMQVGVSFSANVPSERLQSMTVVVSKLQAVKKFFVPSCNNPTFTIARVGFRSDLHLKRDEPKLCKFQDPPSITNPQWFETSHSSEYYLSINSFHGEFPKKWDSAISSNSRHHPQLLHWRLVSNGKDYGGLSFEITSLVNCTELDILGGLKGSIGYIPPEYGTGGQPSTLGDIYSHGILLQEIFTGKRPTNDEFEGGMGIHQYAEMALPNHAMEIADSFLVSEEKDEDEDKEIYLEKAMMEECLGSLMQVGVSCSANGPSERLQSMTLVVNKLQTIKKW 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1865 762 Pfam Leucine rich repeat N-terminal domain 16 55 IPR013210 -
Alju11g1865 762 SUPERFAMILY Protein kinase-like (PK-like) 629 757 IPR011009 -
Alju11g1865 762 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 633 760 - -
Alju11g1865 762 FunFam Nuclear pore complex protein NUP107 15 172 - -
Alju11g1865 762 Gene3D Ribonuclease Inhibitor 17 109 IPR032675 -
Alju11g1865 762 Gene3D Ribonuclease Inhibitor 110 175 IPR032675 -
Alju11g1865 762 SUPERFAMILY L domain-like 16 272 - -
Alju11g1865 762 Gene3D Ribonuclease Inhibitor 176 283 IPR032675 -
Alju11g1865 762 SUPERFAMILY Protein kinase-like (PK-like) 345 439 IPR011009 -
Alju11g1865 762 Gene3D Transferase(Phosphotransferase) domain 1 333 521 - -
Alju11g1865 762 Gene3D Transferase(Phosphotransferase) domain 1 612 762 - -
Alju11g1865 762 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 343 523 - -
Alju11g1865 762 Pfam Protein tyrosine and serine/threonine kinase 345 422 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1865 Alju-ChrAlju11 39592235 39600941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1865 631 761 Receptor kinase-like Gene Family AT3G47570 40.909 2.93e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju11g1865 PK_Tyr_Ser-Thr 8.6e-08 CL0016