Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1854 ATGCATATAGCCATGGTTGGCAATTGCTTCGGTGCCTTGAATTGTTGTAGAGGGAAGAATGAACCTGCTGGCCAATCAGATGAACAAGTGGTTGCAACTAAAACTTTTAGTTACAATTCAATGAGATCAGCGACAGGAGATTTTCATCCATCTAGCAGAATTGGTGGGGGAGGTTATGGAGTTGTCTACAAGGGAGTCTTAAGGGATGGTACTCAAGTTGCTATCAAGTCTCTTTCTGTAGGGTCAAAACAAGGAACAAAGGAATTTATGACAGAAACTGATATTATATCAAAGATACAGCATCCAAACCTTGTGCAACTTATTGGCTGCTGTGTTGAGGGCTCCCATAGGATGTTGGTGTACGAGTTTCTGGAAAACAACAGCCTTGAAAGTTATTTGCTTGGTTCAAAAAGCAAATGTGTTGCTCTGGATTGGCCCAAGAGGGCTGCTATCTGCTGTGGTACAGCTTCCGGTCTTGAATTTCTTCATGAAGATGCTCAACCAAATGTTGTTCACAGAGATATCAAGGCTAGTAACATACTGCTTGATGGGGACTTTAATCCTAAAATAGGGGATTTTGGCCTTGCAAAGCTTTTTCCTGACAATGTCACTCATGTTAGTACCCGAGTGGCAGGAACTGTGGGATATCTAGCTCCAGAATATGCACTTCTAGGACAACTTACAAAGAAGGCGGATGTGTACAGTTTTGGGATTCTCATGCTCGAAATAATCAGTGGTAAAAGTAGCAGTAAAGCTGCATTTGGAGATAATCTCTTGGTTCTAGTGGAATGGGCTTGGAAGCTGAGAGAAGAAGGCAGGCTTCTGGATATTGTGGATCGGGAACTAACTGAATATGATGAGAAGCAGGTGTTGCGTTTCATCAAAGTTGCTCTGTTCTGTACTCAAGCAGCTGCACAACACCGACCCACCATGAAGCAAGTAATAAAAATGCTCACCAAGGAAGTGCATTTGAATGAGAGGGCACTAACTGAACCTGGAATTTACAGGTGGAATAGCTCGAAAGAATACGGCAATTCGTTGTTGGATGGGTCATCGTCTTCTCAAGCAAACAAGCATAGAAGTTCCAAATATCCGTACATAACATCAAGCCATTTTAGCGGTGCTGATTTGGATACACAGATACTTCCTAGGATCATTTGTTTTAGCGTACCCAAGTTCTTTCCATCCAAAGGGGTCCGATGA 1203 0.4264 MHIAMVGNCFGALNCCRGKNEPAGQSDEQVVATKTFSYNSMRSATGDFHPSSRIGGGGYGVVYKGVLRDGTQVAIKSLSVGSKQGTKEFMTETDIISKIQHPNLVQLIGCCVEGSHRMLVYEFLENNSLESYLLGSKSKCVALDWPKRAAICCGTASGLEFLHEDAQPNVVHRDIKASNILLDGDFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSKAAFGDNLLVLVEWAWKLREEGRLLDIVDRELTEYDEKQVLRFIKVALFCTQAAAQHRPTMKQVIKMLTKEVHLNERALTEPGIYRWNSSKEYGNSLLDGSSSSQANKHRSSKYPYITSSHFSGADLDTQILPRIICFSVPKFFPSKGVR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1854 400 CDD STKc_IRAK 67 320 - -
Alju11g1854 400 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 33 352 - -
Alju11g1854 400 SUPERFAMILY Protein kinase-like (PK-like) 28 318 IPR011009 -
Alju11g1854 400 ProSiteProfiles Protein kinase domain profile. 48 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1854 400 SMART serkin_6 48 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1854 400 FunFam Putative LRR receptor-like serine/threonine-protein kinase 124 330 - -
Alju11g1854 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Alju11g1854 400 Gene3D Phosphorylase Kinase; domain 1 15 123 - -
Alju11g1854 400 Pfam Protein tyrosine and serine/threonine kinase 52 318 IPR001245 GO:0004672|GO:0006468
Alju11g1854 400 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Alju11g1854 400 Gene3D Transferase(Phosphotransferase) domain 1 124 331 - -
Alju11g1854 400 FunFam Receptor-like serine/threonine-protein kinase At4g25390 17 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1854 Alju-ChrAlju11 39486316 39490988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1854 27 333 Receptor kinase-like Gene Family AT1G56120 49.839 2.18e-105 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju11g1854 PK_Tyr_Ser-Thr 4.4e-47 CL0016