Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1846 ATGACTACTGTTCAACAAGAGGCATTGATCTTGGAGAATGGCCCCGCCAAGGGTTTGAGCAGGGAGATGAGGCATGGAAGGACTGCTCATAACATGTCCTCTTCTTCCTTGCGCAAGAAATCTGACCTAACTCTTGTTTCCAAGGTTCAATGGTGTTTACTCAGGAATCTGCTCTTCAATTTCCAGGAGGTCATTCTTGGCACCAAGTTGTCCATTCTCTTTCTTGCGATTCCCTTTGCCATCGTCGCCGAAGTCTACAGGTTCGCTCAATCTTGGGTTTTTGCGTTGAGCTTACTAGGACTTGCACCACTAGCTGAACGCGTCAGCTTCTTGACAGAACAAGTTGCTTATCACACGGGTCCAACAGTTGGAGGACTCTTAAATGCTACATTTGGCAATGTCACAGAACTCATAATAGCAATATTTGCTCTCAGAAATTATAAAATAGCTGTGCTTAAGCATTCTCTCTTGGGTTCAGTCCTTTCAAACCTTCTTTTAGTTCTTGGAACCTCTCTCTTTAGTGGTGGAATAGCAAACATCAGAGGAGAACAAAAATTTGATAGGAGACAGGCAGATGTGAACTCACTTATGCTGCTGCTGGCATTATTGTGCCACTTGTTGCCTTTGTTGTTCAAATATTCTGACATCTCAGCTGCTCTTGATACAGACCCATCTCTCCACTTGTCAAGAGTCTCAAGTATTGTGATGCTGATAACGTATTTTGCTTACCTTGTCTTCCAACTTTGGACCCATCGCCAGTTATTTGAAGCTGAGGATGAAGAAGATGATAATGATAATGTTGCAGAAACAGCTGTGATAGGATTTTGGAGTGGGTTTGCATGGCTTGCCGGATTGACTGTACTCATTGCTATCTTGTCTCAATTTGTGGTGGACACAATTGAGGGTGCTTCAGATTCATTGAACCTCTCTGTCAGCTTCCTTAGCATCATCTTGTTGCCAATAGTTGGCAATGCAACTGAACATGCAGGAGCAATCATATTTGCTTTGAAGAACAAGCTAGACATATCATTAGGTGTTGCTTTAGGTTCTGCAGTTCAGATTTCCATGTTTGTGGTTCCCCTGTGTGTGGTTATTGCTTGGATTATGGGTATCAAAATGGACCTTGACTTCAATCTCCTTGAGACCGGTTCCCTTGCTTTGGCTATTTTAGTCCCATCCTTTACTTTACAGGATGGGACTTCTCACTACATGAAAGGCCTTGTTCTCCTGTTCTGCTACGTTGTTATTGGAGCATGCTTTTTTGTACAAAGAACACCACGCAACCAAGCTGATGTTCCAAACATGATCCTTAAATCCGCAACTGAAGCTGCTTTGAGAGCTTAG 1344 0.4308 MTTVQQEALILENGPAKGLSREMRHGRTAHNMSSSSLRKKSDLTLVSKVQWCLLRNLLFNFQEVILGTKLSILFLAIPFAIVAEVYRFAQSWVFALSLLGLAPLAERVSFLTEQVAYHTGPTVGGLLNATFGNVTELIIAIFALRNYKIAVLKHSLLGSVLSNLLLVLGTSLFSGGIANIRGEQKFDRRQADVNSLMLLLALLCHLLPLLFKYSDISAALDTDPSLHLSRVSSIVMLITYFAYLVFQLWTHRQLFEAEDEEDDNDNVAETAVIGFWSGFAWLAGLTVLIAILSQFVVDTIEGASDSLNLSVSFLSIILLPIVGNATEHAGAIIFALKNKLDISLGVALGSAVQISMFVVPLCVVIAWIMGIKMDLDFNLLETGSLALAILVPSFTLQDGTSHYMKGLVLLFCYVVIGACFFVQRTPRNQADVPNMILKSATEAALRA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1846 447 FunFam Vacuolar cation/proton exchanger 121 265 - -
Alju11g1846 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 23 426 IPR004713 GO:0006812|GO:0008324|GO:0016020
Alju11g1846 447 Gene3D - 121 262 IPR044880 -
Alju11g1846 447 Gene3D - 264 421 IPR044880 -
Alju11g1846 447 NCBIfam calcium/proton exchanger 56 421 - -
Alju11g1846 447 NCBIfam calcium/proton exchanger 74 421 IPR004798 GO:0006816|GO:0015369
Alju11g1846 447 FunFam Vacuolar cation/proton exchanger 266 422 - -
Alju11g1846 447 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016020|GO:0055085
Alju11g1846 447 Pfam Sodium/calcium exchanger protein 278 416 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1846 Alju-ChrAlju11 39394779 39398222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1846 10 429 Antiporters AT2G38170 68.298 0.0 560