Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1834 ATGGATCAGATTCATCTTCACCACCACCACCATCTTCTTCCCCAACAGCATCATGATCTTCCTCAGCCTCAGCCTCTTGGTGGTATTACCATGAACGTGGATGTGAGTAGCGGCGGTGTCGGTGTGGGTTTGGGTGTGGCCGCCGCCGCCGTCGTGGACAGGTTGCCGCAGTGGAGCGTACAAGAGACAAAGGAGTTTCTGGGGATTAGAGCCGAACTAGATCAGAATTTCATGGAGACAAAGAGGAACAAGCAGCTATGGCAACTCATATCTAACGCCATGGCCGATAAGGGTTACTTTCGTAGCCCTGAACAGTGCAAGTGCAAGTGGAAAAACCTCTTCACCAGGTACAAGGGATGTGAAACAGCAGAGCCAGAAAGTGTAAGGCAACAATTCCCATTTTACAAGGAGCTCGAAGCGATTTTCACGGCGAGGATGCAGAGAATGATGTGGGCGGAGGCCGAAGGAGGAGTGAAGAAGAAGACTGCCACAGCAGCCGCGGCCGGAAACGTGTCGTCGGAAGACGAAGAAGAAGACGATGGCAAGAACAACAACGAAGAGATAAGCACGGATAATCATCAGGGAGAGATGAGGAGGAGGAAGAAGATGAAGAGATCAAGCGAAATTCACAGCAGCAGCAAGAAGCTGAAGGAGATACTGGAAGAGTTCATGAAACAACAGATAGAGATAGAGACAAAGTGGATGAAAGCTTTTAGAGAGAGAGACAAAGAGAGAAGGATGAGAGAGATGGAGTGGAGGGAAGCCATGGAAGCTCTGGAGAATGAGAGGATGATGATGGAGCAGAGATGGAGAGAGAGAGAAGAAGAGAGAAGGGTTAGAGAAGAAGCTAGGGCTGAGAGAAGAGACGCTTTAATCACTTCTCTTCTCAACAAGATCATCTCAAGACCTGAAATTTAG 918 0.4891 MDQIHLHHHHHLLPQQHHDLPQPQPLGGITMNVDVSSGGVGVGLGVAAAAVVDRLPQWSVQETKEFLGIRAELDQNFMETKRNKQLWQLISNAMADKGYFRSPEQCKCKWKNLFTRYKGCETAEPESVRQQFPFYKELEAIFTARMQRMMWAEAEGGVKKKTATAAAAGNVSSEDEEEDDGKNNNEEISTDNHQGEMRRRKKMKRSSEIHSSSKKLKEILEEFMKQQIEIETKWMKAFRERDKERRMREMEWREAMEALENERMMMEQRWREREEERRVREEARAERRDALITSLLNKIISRPEI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1834 305 Pfam Myb/SANT-like DNA-binding domain 57 141 IPR044822 -
Alju11g1834 305 CDD GT1 56 121 - -
Alju11g1834 305 ProSiteProfiles Myb-like domain profile. 58 114 IPR001005 -
Alju11g1834 305 MobiDBLite consensus disorder prediction 156 213 - -
Alju11g1834 305 PANTHER FI21293P1 39 301 - -
Alju11g1834 305 Coils Coil 249 276 - -
Alju11g1834 305 MobiDBLite consensus disorder prediction 1 22 - -
Alju11g1834 305 FunFam Zinc finger and SCAN domain-containing 20 58 119 - -
Alju11g1834 305 Gene3D - 58 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1834 Alju-ChrAlju11 39254570 39257068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1834 46 299 Trihelix Transcription Factor Family AT2G38250 53.125 4.44e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju11g1834 Myb_DNA-bind_4 3.6e-20 CL0123