Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1804 ATGGAAGGAAGAAAGGAAGGCTCGGAATGCTCGAAAACAAGCCCTTCTAGCTATGATAATTGTGACGAATTAGAAGAAGCGTGCGCCAGCAAGAGCAAGACCAATGAAGAAGAAGAAGAAGAAGGTAAGAAGAATATTATAGATAATATTAATGGAGGAAGCTGGAGCAATAGCACGGTGGAAGAGACGACGGAGAAGAAGCCGTCAGTGAGGCCTTATGTGAGATCCAAGATGCCAAGGCTCCGATGGACTCCTGATCTTCATCTTCGATTTGTTCATGCCGTTCAAAGGCTTGGAGGAGAAGAAAGAGCAACACCAAAGTTGGTTCTCCAATTAATGAACATCAAAGGCCTGAGTATTGCTCATGTGAAGAGTCATCTACAGATGTATAGGAGCAAGAAGATAGATGATCCAAGCCAAGTATTGGCTGATCATAGGCACCTTGTAGAAAGTGGAGACAGAAGTATGTACAGTCTCAACCAAATTCCCATGCTTCAAGGTTATAATCCCTGCCAAACTTCAACCTTCAGATATGGATATGGGGGCGCTTCTTTGAGTGTGTATGACAAAATGGTTCATAGCCCTTTTAATATGGGTCGGAGTCTGAATATGGATCATGAATCCGGGTCATCTGGGTTTCACAGCATTTTTCAGGTGGATCCTTCAAATTTTCTGAAGCAATCATCATCAACAAACAAAATCTATGAGCCTAAAGAAAATCAAATCCTCTCATTCGGTGGCCATCATCAAGAACCCATCTTCAACGTTGGAACCAGATTCAGCCTTCAGAATAGTAACAGTTCTGATCTTAACTACTCATTGACCCATATAGGACCAACAATAAGATCAGAAGAACAATTTCTTCCTCTTATGAAGGATCATGATCAAACAAAGACGACAACGCTGAAAAGAAAGGCTTCTGATTCTGATCATAATAATAATCACCACCTTGATCTGGATCTATCACTCAAGTTAAGTTCAAGGGTTGATAATGACAGTGCAAAGAAGAATCGTCATCAAGAAAGGAATCATTTGGAGGAGAATGATGATGAAGAAGATGATAGAAATCTCTCATTGTCTTTGTATTCTCAAATTTCATCGTTTTCTGATACTAATAATAATTATGCTAGGAACAGCTTCAAGGAGGGAGAACACAGTGATTACAAGGAGAGATCAAGGAGGGAAAAGGCTAGTACACTGGATCTGACTATATGA 1215 0.4041 MEGRKEGSECSKTSPSSYDNCDELEEACASKSKTNEEEEEEGKKNIIDNINGGSWSNSTVEETTEKKPSVRPYVRSKMPRLRWTPDLHLRFVHAVQRLGGEERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKIDDPSQVLADHRHLVESGDRSMYSLNQIPMLQGYNPCQTSTFRYGYGGASLSVYDKMVHSPFNMGRSLNMDHESGSSGFHSIFQVDPSNFLKQSSSTNKIYEPKENQILSFGGHHQEPIFNVGTRFSLQNSNSSDLNYSLTHIGPTIRSEEQFLPLMKDHDQTKTTTLKRKASDSDHNNNHHLDLDLSLKLSSRVDNDSAKKNRHQERNHLEENDDEEDDRNLSLSLYSQISSFSDTNNNYARNSFKEGEHSDYKERSRREKASTLDLTI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1804 404 Pfam Myb-like DNA-binding domain 81 131 IPR001005 -
Alju11g1804 404 MobiDBLite consensus disorder prediction 380 404 - -
Alju11g1804 404 MobiDBLite consensus disorder prediction 49 63 - -
Alju11g1804 404 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 134 IPR006447 GO:0003677
Alju11g1804 404 Coils Coil 21 41 - -
Alju11g1804 404 Gene3D - 78 135 - -
Alju11g1804 404 MobiDBLite consensus disorder prediction 371 404 - -
Alju11g1804 404 MobiDBLite consensus disorder prediction 297 346 - -
Alju11g1804 404 MobiDBLite consensus disorder prediction 1 71 - -
Alju11g1804 404 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 60 292 IPR046955 GO:0003700
Alju11g1804 404 SUPERFAMILY Homeodomain-like 77 133 IPR009057 -
Alju11g1804 404 MobiDBLite consensus disorder prediction 24 46 - -
Alju11g1804 404 MobiDBLite consensus disorder prediction 297 355 - -
Alju11g1804 404 FunFam Myb family transcription factor 77 135 - -
Alju11g1804 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 135 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1804 Alju-ChrAlju11 38918837 38920654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1804 54 140 G2-like Transcription Factor Family AT2G42660 61.386 1.28e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju11g1804 Myb_DNA-binding 1.9e-07 CL0123