Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1798 ATGGAGCCTTTGATACTTGATGATCCCTCTTCCTCATTCTATGAAGGCATAAACTCAACTTTTGATCAACTTGAGTCTTTTGACTTCAACTTGGACACTCCTTTGTTCACTGCTTCAGAGGATACTTCAGATATTGTCCAATTCCCTTCCTCCATCTTCTCCGATGATCATGTCTATTGTCCAATTGATGAGGAAAACTTTGAATTCCCATCTTTAATGGAAGATTTCTCCATGGATCTCGACTTCGACCAGGTTCTGAGTTCGCAAAGTCTGGTTGGATACCCACAAGAAAGTGAGGGAATAATAAGCTTTTCTTCACAGAACTTATGTTCTGATATAGAACATGGTTGGAGTCCAACAAAATCTATTCAATCAGACATGTCTACAGTAGTACAAGCACAACCATCATCACTGATCATACCAGAACAGAACATGGAGATGGAGAAACAGTTCAGTCTTCCTCATCTTCTAGAAGCCATTGGAGAAGCCTTAGAGCAAGGACATAACACACTTTCACAAGTGATTCTGAAACACATCAGCCACAAAGTAAGTCCTCTTGGTGATCCTCTTGAACGTTTGGCCTTCAATTTGTCCCAAAATCATGACCCTAAAGAACATGGGACTTTCATCAAACAGGAGGCGTGCAAGAGCTTCGACAAAGCTTTCAAAGCTATCTACCAAGGCCTCCCACATGGAAGAATTGCTCATTTTGCAGCCAATTCAGCAATTCTAGGGTCTATTCCAGAGGATTCAGAGGTCATTCATATAATAGACTTTGATATGGGAGTAGGTGTTCAGTGGCCTCCATTAATGGAGGTTATTGCTCAACACCACAAAACATTGAAACTCACTGCAATTAGATTAGAAGAAGATGAAAGTTCAGATCTTGAATGTGTTTCTAAACGGAAATTTGAAGAAATCAAGGGGAACCTCCATGAGCATGCCAAATCATGTGGCTTGAAGTTGAAGGTGGAGGAACAGAGTATAGAGGACATGGTGACAGAGCTCAAGAAATTGAACAAAAGAGGTGGAAATGGAAATGAAAAGAGAAATTTCATGGCTTTCAATTGCATGGTGGGTCTCCCACATATGGGTAGGGTTAGAAGCAGAAGCCATTTCTTGGAATTTTTGAGGGTAGCAAGGGATTTCATCAAAAGCTCACCTTCAAACAGGGGAATTATAGCCTTTGGTGATGGAGAAGCCTGTGAGAAACTGAAAAACAGCACAAACTTCATCTCATTCTTTAATGGCCATTTGGTTCATTACCATGCTTTATTGGAATCCATGGAATCAAATTTCCCATTCCAATTCTCTGAGGCAAGAACAGCAATGGAGAATCTATTTGTGGCGCCATATATATCAAGTGATGATTGGTTTCAGAAGTGGGAGGAGATGAGACAATATAGGAATCTTGAATCAGAAATAGGGTTACAGGGTTGGAGCTTGAGGGAAGAGACATTAATGGAAGTTGGAGAAATGCTTAGAGGAATCAAAGGGTCGTATGAAGTGAAGATTGAAGGGAACAATGGCAATGAAATGGTTCTGCAATGGAAAGGAACACAGCTTCTGAGAATTTCAACATGGGCAAATTAA 1593 0.4055 MEPLILDDPSSSFYEGINSTFDQLESFDFNLDTPLFTASEDTSDIVQFPSSIFSDDHVYCPIDEENFEFPSLMEDFSMDLDFDQVLSSQSLVGYPQESEGIISFSSQNLCSDIEHGWSPTKSIQSDMSTVVQAQPSSLIIPEQNMEMEKQFSLPHLLEAIGEALEQGHNTLSQVILKHISHKVSPLGDPLERLAFNLSQNHDPKEHGTFIKQEACKSFDKAFKAIYQGLPHGRIAHFAANSAILGSIPEDSEVIHIIDFDMGVGVQWPPLMEVIAQHHKTLKLTAIRLEEDESSDLECVSKRKFEEIKGNLHEHAKSCGLKLKVEEQSIEDMVTELKKLNKRGGNGNEKRNFMAFNCMVGLPHMGRVRSRSHFLEFLRVARDFIKSSPSNRGIIAFGDGEACEKLKNSTNFISFFNGHLVHYHALLESMESNFPFQFSEARTAMENLFVAPYISSDDWFQKWEEMRQYRNLESEIGLQGWSLREETLMEVGEMLRGIKGSYEVKIEGNNGNEMVLQWKGTQLLRISTWAN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1798 530 Coils Coil 322 342 - -
Alju11g1798 530 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 136 522 IPR005202 -
Alju11g1798 530 Pfam GRAS domain family 155 528 IPR005202 -
Alju11g1798 530 ProSiteProfiles GRAS family profile. 144 529 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1798 Alju-ChrAlju11 38731146 38732738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1798 141 528 GRAS Transcription Factor Family AT5G66770 25.432 1.34e-15 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju11g1798 GRAS 1.8e-39 CL0063