Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1797 ATGGATACCCACAAGAAAGTGAGGGAAGAACAAGCTTTTCTTCACAGAACTTATGTTCTGAGAGAACATGCTCGGAGTCCAATCTCATCGATGCAATCAGACATGTCTACAGCAGTACAAGTACAACAATCACTGATCATACCAGAACAAGACATGGAGATAGAGAACCAGTTGAGTTTTCCTCATCTTCTGGAAGCCATTGGAGAAGCCTTAGAGCAAGGTCACAAAACACTTTCACAAGTGATTTTGAGATGCATCAGCCACAAAGTAAGCCCTCTTGGTGATTCTCTTGAACGTTTGGCCTTCAATTTGTCCCAAAATCATGATCCTACAGAGCAAGGGACTTTCATCAAACAGGAGGCCTGCAAGAACTTGCATCACTTTTTCAAGGCTATCTACCAAGGCCTCCCATACGGAAGAATTGCTCATTTTGCAGCAAATTCAGCAATTCTAGAATCTATACCAGATGATTCAGAAGTGATACATATAATAGACTTTGATAAGGAAGAAGGTGTTCAATGGCCTCCACTCATGGAGGCTATTGCTCAAAAGCACAAAACTTTGAAACTGACTGCAATCAGATTGGAAGAAGAGCACAAGCTTGATACTAATTTTGTTTCAGCCCAAATGGAATTTGAAGAAATCAGAAGGAACCTCAATGAGCATGCCAAATCATGTGGCTTGAAGTTGAAGGTAGAGGAACAGAGTATAGAGGAAATGGTGACAGGGCTCAAGAAATTGAACAAGAGAGGTGGAAATGGAAATGTAAACAGAAATTTTGTGGCCTTTAATTGCATGGTGGGTCTTCCACATATGGGTAGGGTTAGAAGCAGAAGCCATGTCTTGGAATTTCTGAGGGTAGCAAGAGATTTCATCAAAACCTCACTTTCAAACAGGGGAATTATAGCTTTTGGTGATGGAGAAGCCTGTGAGAAACTGAAAAACAGCACCAACTTCAAGTCATTCTTTAATGGCCATTTGGTTCATTACCATGCTTTGCTAGAATCCATACAAATTTTCCACTCCAATTCTCTGAGGCAAGAACAGCAATGGAGAATCTATTTGTGGCGCCATATATATCAAGTGAGGATTGGATTCAGAAGTGGGAGGAGATGA 1116 0.4104 MDTHKKVREEQAFLHRTYVLREHARSPISSMQSDMSTAVQVQQSLIIPEQDMEIENQLSFPHLLEAIGEALEQGHKTLSQVILRCISHKVSPLGDSLERLAFNLSQNHDPTEQGTFIKQEACKNLHHFFKAIYQGLPYGRIAHFAANSAILESIPDDSEVIHIIDFDKEEGVQWPPLMEAIAQKHKTLKLTAIRLEEEHKLDTNFVSAQMEFEEIRRNLNEHAKSCGLKLKVEEQSIEEMVTGLKKLNKRGGNGNVNRNFVAFNCMVGLPHMGRVRSRSHVLEFLRVARDFIKTSLSNRGIIAFGDGEACEKLKNSTNFKSFFNGHLVHYHALLESIQIFHSNSLRQEQQWRIYLWRHIYQVRIGFRSGRR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1797 371 Pfam GRAS domain family 62 344 IPR005202 -
Alju11g1797 371 Coils Coil 178 198 - -
Alju11g1797 371 ProSiteProfiles GRAS family profile. 51 371 IPR005202 -
Alju11g1797 371 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 349 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1797 Alju-ChrAlju11 38718486 38719601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1797 55 193 GRAS Transcription Factor Family AT2G01570 32.680 3.25e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju11g1797 GRAS 1.3e-29 CL0063