Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1795 ATGCAGAGAAGACGAGGAGATTTTCTCTTTTTTGTGGCCTTATCTATATGCCTAATTACCCTAACTCACTCTGCAACTGTAAGAAGAGGTGGAAGAAGAAGACGCTCCCCTGTAACTATACCAGTAGGAGTGATTCTGGATTTGGATTCATCACTTGGTTCCATGGCTCTCAACTGCACCAACATTGCACTTCAAGATTTCTATTCTACAAATAATAACTATTCAACCAAACTCCAACTTCATTTCAGGCATTCCGGACAAGATCTCCTCACTGCAGCTTCTGCTGCTTGGGATCTAATGAATAACGAAAAGGTGCATGCAATCCTGGGACCTCAAACCACAGAGCAAGCAAGGTTTGTTGTAGAACTTGGTAAAGAGTCTAATGTACCTGTGATCTGGTTTTCTCCATCTGGTCCTTCTCTTTTGCCACCTCGTTCCCGATTCTTCATCCACTCCGAATCCACTGGAAGCCATTGCTATCAGTTCGAAGCTATAGCTGCCATTATCAAAGCTTATAATTGGCAATCAGTGATCCCCATTTATGAAGACCCAGAATTCGGTAATGACCTGATTCCATGTCTCACTTATGCCTTGCAAGACATGGACACTCGAGTGCCTTATAGAAGTGCCATTCGTCAAAATTTCACGGATGCTCAAATCACCAACGAACTTAAGAAGATCAAAGGCAAGCGAACATATGTGTTTCTTGCTCATATGACCGTGGAACTTTGGTCAAGACTAGTGGAACATGTAAAAAAAGCAGGTTTGATGAGTAAAAGATACGCTTGGATACTTACGCAAGGCCTATCTTCGGTGATGAATGCTGAAGCTAATGATATAAAAGTGAAAGGCTACATGGACGGTGCTTTAGGGCTAAGGCCAGTCATTTTTTCCAACATAACTAAGCGCCTTTCCTTAGCAGAAACATTAAAGTCTGAGTACGATAAAACTCTCTCTCTATATGGCTTGTGGGTCTATGACACTATCACAGCTTTGGCCGATGCGGTTGAGAAGACCGGCTTAGTCGTCAATTCTACTTTCAGATATGGGAATGGAAGAAGAGATGAGTTTGCAGATATAGGCCCAAAACTTCAGAGAGCAATTATGGATACTGATTTCCAAGGCCTGTCTGGTAATTTCAATTTGAGGCAAGGGCAACTTGCACCATCACAATTTGTAGTGTACAATGTTAAAGGCCAAGGAGAAAGTATCATTGGATATTGGAGCTCTGAAACTGGACTTGTTAAATATCGCAGTGTAGTTGATGAAACAGCTGGTAAATACAAACTAAGGGACCAGATATCTCAAGGTAACACAAAGGACTGTTTATCAAAGTTGAAAGTTGGGGTCCCGAAAACGCATTTTACCGAATTGGTTGATGTTACTGTAAAAGGCGAGAATGTAGTAGCTACTGGTTTTGCTGTTGATGTGTTTAAAAAAGTGGTTGATGTTTTGCGATTTCCTTTACACTGTTGTGAGTTTGTGCATGTGCCTGTGAACAATAATACTGGAGAGCTGACGCCCTCGAGCTATGATGATCTCCTCCGCAATATCACAAACAAGGATGTTGATGTTGATGTTATAATCGGAGACATTACAATTGTAGCAAATCGCACAAAATATGTTGATTTCACAATGCCGTATTTAGATTCTAGCCTGTCAATGGTGATAAAGGTGAGGTCCGATTCCAAAAGTCAATGGATCCTCCTCAAACCTTTTCATTGGATCCTATGGTTGATTCTTGGTGCAATTTTTGTGGGTGCAACTGTTGTTGTAATTATATTGGAGAGGAAAGAAAAGGATGATGATAAAAGCAAATTCAAAGAGTATGTCCACAATCCCTTCCTCATTTACACGAGCGATATTCAATTTTTGAGAAGTGGAATGTCTAAATGGGTGGTGATAGTGGTCACATTTTTGTTGACCATAGCTGTGCAGGTTTACACAGCAAATTTAACTTCAATCTTAACAGAGAGGACAATGGTAAAGTCTTCTCCATGGAAGGACTTGCAAGAGATTAAAAGGAACAATGGATCATTGGGATATCAAAACAATTCTTGGGTGAAAGGGTTTCTGAATTACCAAATGGGATTTAAAGATTATCAGTTAAAGCCTTTAGGAAGTCCTGAAAATTATATTGAAGCGTTATCAAATGAAGATGAAAAAGAAAATGTTGATGCTATCTTTGATGAAACTCCTTATCTCATGCTCTTGCTTTCTAATTGCTCTTCTTGCAAGATGACAGGACCAATCTATAAAACTGGTGGATTTGCCTTTGCATTCCCAAAAAATTCTAGCTTGGTCTCGGATTTTTCAGCTGCAATAATACAAGTGACTCAAACTGTTATGACATTTCGTGATATGAAGAAGAACATATCCTTACCTGTTACCATCAACAAATCCGAATACAAAAGTGATGTTGAGATCCGGAGTTTGACGATAGATGACTTTGGGGGCCTTTTCCCAATAGCATTCTTTGTTTTTGTTTTCTTCTTAAGCCTTTCAATTCCTAAAATTCCATCTATCACTTTTTGGCTGCATAAGAAATTGGTTTCATTTTGA 2562 0.3954 MQRRRGDFLFFVALSICLITLTHSATVRRGGRRRRSPVTIPVGVILDLDSSLGSMALNCTNIALQDFYSTNNNYSTKLQLHFRHSGQDLLTAASAAWDLMNNEKVHAILGPQTTEQARFVVELGKESNVPVIWFSPSGPSLLPPRSRFFIHSESTGSHCYQFEAIAAIIKAYNWQSVIPIYEDPEFGNDLIPCLTYALQDMDTRVPYRSAIRQNFTDAQITNELKKIKGKRTYVFLAHMTVELWSRLVEHVKKAGLMSKRYAWILTQGLSSVMNAEANDIKVKGYMDGALGLRPVIFSNITKRLSLAETLKSEYDKTLSLYGLWVYDTITALADAVEKTGLVVNSTFRYGNGRRDEFADIGPKLQRAIMDTDFQGLSGNFNLRQGQLAPSQFVVYNVKGQGESIIGYWSSETGLVKYRSVVDETAGKYKLRDQISQGNTKDCLSKLKVGVPKTHFTELVDVTVKGENVVATGFAVDVFKKVVDVLRFPLHCCEFVHVPVNNNTGELTPSSYDDLLRNITNKDVDVDVIIGDITIVANRTKYVDFTMPYLDSSLSMVIKVRSDSKSQWILLKPFHWILWLILGAIFVGATVVVIILERKEKDDDKSKFKEYVHNPFLIYTSDIQFLRSGMSKWVVIVVTFLLTIAVQVYTANLTSILTERTMVKSSPWKDLQEIKRNNGSLGYQNNSWVKGFLNYQMGFKDYQLKPLGSPENYIEALSNEDEKENVDAIFDETPYLMLLLSNCSSCKMTGPIYKTGGFAFAFPKNSSLVSDFSAAIIQVTQTVMTFRDMKKNISLPVTINKSEYKSDVEIRSLTIDDFGGLFPIAFFVFVFFLSLSIPKIPSITFWLHKKLVSF 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1795 853 Gene3D - 51 390 - -
Alju11g1795 853 Gene3D - 427 566 - -
Alju11g1795 853 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 834 IPR015683 -
Alju11g1795 853 SUPERFAMILY Periplasmic binding protein-like I 39 411 IPR028082 -
Alju11g1795 853 SUPERFAMILY Periplasmic binding protein-like II 446 780 - -
Alju11g1795 853 PIRSF IGluLR_plant 7 841 IPR017103 -
Alju11g1795 853 Gene3D - 567 694 - -
Alju11g1795 853 Pfam Receptor family ligand binding region 60 399 IPR001828 -
Alju11g1795 853 Pfam Bacterial extracellular solute-binding proteins, family 3 464 780 IPR001638 -
Alju11g1795 853 Gene3D - 157 413 - -
Alju11g1795 853 SMART GluR_14 445 787 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1795 Alju-ChrAlju11 38654406 38659116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1795 2 780 Ion Channels AT2G29120 34.272 2.07e-134 422