Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1793 ATGCAGAAAAGGCGAAGAGAATCTCTCATATTTGTGAGCTTATTATCATGCCTAATTACCCTAACTCAGTCTGCAACTGTATCCATACCAGTGGGAGTGATTCTGGATTCGAATTCATCACTTGTCAACACCACTCTCAACATCGCACTCCAAGATTTCTATGACACACATGATTCATATACAACCAGGCTCCAACTTCTTTTCAATACATCTGAAAACGATCTCGGTGCAGCTTCTGCAGCTTGGTATCAAACATATAAGCAAAATGTGAGTGCAATCCTGGGACCTCAAAACTCAGAACAAGCCAGGTATGTTGTAGAACACGGTAACGTTGCTAAGGTACCTGTGATTTGGTTTTCTCCATCTGGTCCTTCTCTTTTGCCACCTCGTACCCGATTCTTCATCCACTCCAACTCCACCAGAAGCCATTGCTCTCAGTTCGAAGCTATAGCTGCCATTATCAAAGCTTATAATTGGCAGTCTGTGATCCCCATTTATGAAGACCCTGAGTTCGGCTATGACCTAATTCCATGTCTCTCTTATGCCTTGCAAGACATGGACACTCGAGTGCCTTACATAAGTGCCATTAGTCAAAATTTCACGGATGCTGACATCACCAACGAGCTTAACAAGATAAACGACAAGCGAACAAGTGTGTTTGTTGCCCATATGACTGTGGAGCTTTGGTCAAGACTCGTGGAACCTGCACAACATGCAGGGATGATGAGTAAAGGATACGCTTGGATACTTACACAAGGCCTTTCTTCTGTGCTAGATCCTGAAGCTTTAAATGTAACAGCGAAAGGCTACTTGGATTGTGCTTTGGGTGTGAAGCCATCATTGAATGATTCCAACAAGAATAATCGCATTTCATTATCGACAACATTAATGTCCAAGTACGGTAAAACTCTGTCTCTATATGGCCTCTGGGCTTATGACACTGTCACAGCATTGGCCAATGCGGTTGAGAATGCTGGCTTGGTCGATTATGACGTTGCAAATAGAGGAACGCACACTATAACTGGCCCAAAACTTCGAACATCAATTCTGGAAACTAATTTCTCAGGCCTGTCAGGGAATTTCAATTTGACGCAGGGACAATTAGGACCATCAGAATTTTTAGTATACAATGTGAAAGGCCAAACAGAAAGGATCATTGGATATTGGAGACCCGAAACAGGATTTAATCAAAATGACAGTGTAGTGGTTCAATGGCCGGGTAACACTGAGGAAAGACCTCCAAAGCTGAAAATTGGGGTCCCAACAGAAGCGAATTTTATTGAATTTGCTAATGTTAATGTAGAAGGGCAGAGTATATCAGCTACTGGATTTGCTGTTGAAGTGTTTAAAAAAGTGGTTGAGGCTTTGCCATTTCCTTTACCTTATGATTTTGTTCCCGTGGACAACACTAATGGATATTATGGTCTTCTCTGCAGTATCACAGACAAGAATGTTGATGTTGATGTAATCATTGGCGACATTACAATTATAGAAGATCGCACAAAATGTGTTGATTTCACAATGCCATATTTAGATTCAAGCGTGTCAATGGTGGTAAAGGTGAGGTCCGACTCCAAAAATGGGTGGATCCTTCTTGAACCTTTTGATTGGAAACTTTGGTTAATTCTTGGTGTGGTATTTGTGGGTGCAACTGTTATTGTAATTATATTGGAAGGAAAAATAAGGGATGATACAGAAAGCAAATTCAGACACTTTGTCCGCAATCCCTTCCTTGTTTACATGAGCGATGTCGAGTCTTTGAGAAGTGGCAAGTCTAAATGGGTGGTGATAGTGATCATGTTTGTGTTGAGCATAGCAATGCAAGTTTACACAGCAAATTTAACAGCAAATTTATCAGAGAGGATAACAACAAAGCCTTCTTCATCGAAGGACTTGCAAGAAATTAAAAGGAACCACAAGCCAGTGGGATATCAAAAAAATTCCTGGGTGAAAGAGTTTCTTATTCACCAAATAGGATTGCAGGATGGTCAGTTAAGGCCTTTAGATAATCATACAGAGTACGAAAAAGCATTATCAAATGAAGACAAAAAAAGTGTGACTGTTGATGCTATTTTTGATGAAACTCCTTATCTCATGCTCTTGCTCTCCAAATGTTCTTCTTGCAAGATGACAGGACCAATCTATAAAGCTGGTGGATTTGCCTTTGCATTCCCAAGGAATTCTTCGTTGGTCTCAAAATTTTCAGCTGCAATATTAGAAGTGACTCAAAATGTGACGGTGTTTCGTGACATGAAGAATAACATAGGGTTACCCATCACCGTTAACAAATCCGAATACAGAAGTAATGTTGAGACGCGAAGTTTGACGAACGATGACTTTGGAGGCCTTTTCCCAATAGTATACTCTGTTTTAGCTCTCTTCTTCATCATTTCAATTCTTAAAATTCCATCTGTCGCTGCGATGCTGAAAAAAGTTCCACCTATCGCTTTCCTGCTGGAAAAAGTTTCATCTATAGCGGTTTGGTCACATAACAAATTTGTTGCTTTTTTAAGTCCCTCCGGCGGAGCTATAATCATTAAAAGCCCTAATTAA 2553 0.4046 MQKRRRESLIFVSLLSCLITLTQSATVSIPVGVILDSNSSLVNTTLNIALQDFYDTHDSYTTRLQLLFNTSENDLGAASAAWYQTYKQNVSAILGPQNSEQARYVVEHGNVAKVPVIWFSPSGPSLLPPRTRFFIHSNSTRSHCSQFEAIAAIIKAYNWQSVIPIYEDPEFGYDLIPCLSYALQDMDTRVPYISAISQNFTDADITNELNKINDKRTSVFVAHMTVELWSRLVEPAQHAGMMSKGYAWILTQGLSSVLDPEALNVTAKGYLDCALGVKPSLNDSNKNNRISLSTTLMSKYGKTLSLYGLWAYDTVTALANAVENAGLVDYDVANRGTHTITGPKLRTSILETNFSGLSGNFNLTQGQLGPSEFLVYNVKGQTERIIGYWRPETGFNQNDSVVVQWPGNTEERPPKLKIGVPTEANFIEFANVNVEGQSISATGFAVEVFKKVVEALPFPLPYDFVPVDNTNGYYGLLCSITDKNVDVDVIIGDITIIEDRTKCVDFTMPYLDSSVSMVVKVRSDSKNGWILLEPFDWKLWLILGVVFVGATVIVIILEGKIRDDTESKFRHFVRNPFLVYMSDVESLRSGKSKWVVIVIMFVLSIAMQVYTANLTANLSERITTKPSSSKDLQEIKRNHKPVGYQKNSWVKEFLIHQIGLQDGQLRPLDNHTEYEKALSNEDKKSVTVDAIFDETPYLMLLLSKCSSCKMTGPIYKAGGFAFAFPRNSSLVSKFSAAILEVTQNVTVFRDMKNNIGLPITVNKSEYRSNVETRSLTNDDFGGLFPIVYSVLALFFIISILKIPSVAAMLKKVPPIAFLLEKVSSIAVWSHNKFVAFLSPSGGAIIIKSPN 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1793 850 SMART GluR_14 417 753 IPR001320 GO:0015276|GO:0016020
Alju11g1793 850 Gene3D - 61 370 - -
Alju11g1793 850 Gene3D - 142 395 - -
Alju11g1793 850 SUPERFAMILY Periplasmic binding protein-like II 413 744 - -
Alju11g1793 850 Gene3D - 529 657 - -
Alju11g1793 850 SUPERFAMILY Periplasmic binding protein-like I 29 414 IPR028082 -
Alju11g1793 850 Pfam Receptor family ligand binding region 43 380 IPR001828 -
Alju11g1793 850 Gene3D - 412 528 - -
Alju11g1793 850 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 798 IPR015683 -
Alju11g1793 850 Pfam Bacterial extracellular solute-binding proteins, family 3 440 746 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1793 Alju-ChrAlju11 38629109 38634945 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1793 11 743 Ion Channels AT2G29120 34.596 6.40e-125 397