Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1787 ATGGTGAGGAAGAAACAAAAGAGGAAGAGTGAAGATAGAGGGGGGGAGAGAGTGAGTGATAGCATGAGAACAATGGCAGAGTTGCAGAAAAGCTTCAAAGCTTCTTCTTATCTCTCAAGTGTGAGTCTTCTTCTTCTCTTAGGATTATCATGGCTTAACATCACAGCAAGACCATCCACGGCGGCCACAGTAATCCCAGTAGGAGTCATTCTTGATCTGAATTCAAAACTTGGTATAATGGTTAGCAACAGCCTCACCTTCGCCGTCCAAGATTACTATTCCGTTAATAACAAAACAGCCACCATGATCCGCCTTATATTCCGGAATGTTTCTCAGAACGACTTCGCCGCCGCGGCAGCAGAAGCTTATAAACTAATGAATGATGAAAAAGTTCATGCCATCCTGGGGCCCCGGAACTCAGAGCAAGCAAGGTATATAGTGAGACTTGGTGAGGGAGTATTCAAAAAACCTGTTATTTGGTTTCCCATGACTGGCCCATCTCTTTTGCCTCCTCCATCACCATCTTCCATCTACACTGGTCAAGGCCTTAATTGCTATCAGTTCCAAACTATAGCTGCTATTATCAAAGCTGTTGGCTGGCAATCTATTGTCCCCATTTATGAAGAGACAGAATATGGCAGTCACCTTGTTCCATGCCTCACCGATGTGTTGAAAGAGATGGCCATACAAATGGCTAACGTAACAGCTATTGATTCAAGTTCAACAGATCTTGTAATTAACACCACGCTTGACACGTTAAACAACATGAGAACACATGTATTTCTTATCCATATGAGCATGGATTTGGGAACAAGATTTATTTTGTCTGCACTGAACAAAGAGATGATCGGTGAAGGGTATGCTTGGATACTTACCCAAGAGCTATCTTCTTTGACAAATCCTCAAGTTAGGGTTATCAGAAACTTGTATAAAGGCTCAATCGTCCCAATCGATAAATTTTCTGATTCTGTTCCTTTGAAAAGCTACATGCAAGGTGCATTGGGAGTGACGCCAATGGATTCGAACAAAACAGATTGGCGTAGGGATAGAGAGAGGTATTTCACTAAGAATTTCGGTGGTACCCTAACTATCTATGGATGGTGGGCTTATCACACAGTCGAAGCATTAGCTATGGCTTTAGAGAAGCTAGGCACAGACAATAATGGCCAAAAACTTGGCAATGAAATTAAGGCTACTACTTTCACAGGCCTGTCAGGGGTAAAATTTAATCTAAGTCAAGGACAACTAGACCAATCAGAGTATGAAGTATACAATGTGATATCTGCAAGAGAAAGGATCATTGGATCTTGGAACCCTACAACTGGGCTTGCTCAAGATTATAGTGAAGGAGGTGGTGGTGATGAGGCATCTGGTGGCCGTGAATACCAACTAAAGGATCCACTGTGGCCGGGTGACACATTGGATAAACCACCAAAGTTGAGGATTGGAGTCCCAAGAAACAATTCTTTTCCAGAATTTGTGAATGTATATAATTCCAATAAACTTCGAGTTGATGGCTTTGCTTATAATGTGTTCTTAAGAGCTCTTGATGTTTTGCCATTTCCGTTAAATAATTATAAGTTTGTTCCCTTGCCGAACAAAAGTAGAAGAGATAACACCACATATGATGACATGCTCTGCACTCAGATGAAAGAGGAGGATCTTGATGCTATAATTGGGGACATCACAATTGTGGCAAGTCGCATAAATTGTGTTGATTTCGCATTGCCGTATTTAGATTCAAGTGTAGCAATGGTGGTTAGGATGAAGAATGCCTCCACTTCAGGGATTCTCTTCAAACCTTTCGAAGGGTTACTGTGGTTAACTCTTGGTGGGATTTTTGTGGCTGCAACTATTATCATACTTATATTAGAAAAATACAAAACCAAAACCAACGGAATAAACAAAATCGACCAATTTCTCATCAACCCCTTCCTTGTTTACAAGATGGATGTTATGGAGAAATTTGCAAGCAGTGCTGCAGGATGGATGGTAATACTGACGTCATTCCTATTCATCTTAGTAGTGCAAGTTTACACAGCTAATTTAACTTCAATTTTAACACAAGGGAGGCAGAAAGAGCCTTCATTTAAGGATGAAACCGAGATTATAAGAAGGAATCTATCTGTGGGATATCGAACTGGGTCTTGGGTGGAAGGGCTTCTAATTCACCAAATAGGATTCAAGCCATCTCAATTAAAGGCTTTAGGAAGTCGCGAAGAGTACAATGAAACATTGTCAAAGGGAACCAAAAATGGAGGAGTGGATGCTATTTTTGATGAAACTCCATATCTCACACTCTTCCTCTCCAAATATAAGTCTGGCTTCATGATGACAGGACCAATCTACAAAACTGGTGGATTTGCCTTTGCATTCCCCAAGAAATCTAGCCTGGGCTTGCACTTCTCGAATGCAATCTTAAAGGTGACTCAAGATGCGGAGCCATATCATGTGCTGATGGCAAGGAGCTCCTTACCAACCTCCGTTGAAGATTGGGAATTTGGAGACGAAAGTCACATAGAGACGTCAAAATTGGACATAGATATCTTTGGAGGACTTTACCCTGTCCTACTATCTGTTGTGGCTCTCTTGTTATGCCTTTCGATTCCATCAGTGATTAAAAGGTTGCGCAATCCATCTTTAGTTACTGAATGGTGGCGTAAGAAGAATCCTTTCAAGTTAGCTAATAAGGCTTAA 2697 0.4127 MVRKKQKRKSEDRGGERVSDSMRTMAELQKSFKASSYLSSVSLLLLLGLSWLNITARPSTAATVIPVGVILDLNSKLGIMVSNSLTFAVQDYYSVNNKTATMIRLIFRNVSQNDFAAAAAEAYKLMNDEKVHAILGPRNSEQARYIVRLGEGVFKKPVIWFPMTGPSLLPPPSPSSIYTGQGLNCYQFQTIAAIIKAVGWQSIVPIYEETEYGSHLVPCLTDVLKEMAIQMANVTAIDSSSTDLVINTTLDTLNNMRTHVFLIHMSMDLGTRFILSALNKEMIGEGYAWILTQELSSLTNPQVRVIRNLYKGSIVPIDKFSDSVPLKSYMQGALGVTPMDSNKTDWRRDRERYFTKNFGGTLTIYGWWAYHTVEALAMALEKLGTDNNGQKLGNEIKATTFTGLSGVKFNLSQGQLDQSEYEVYNVISARERIIGSWNPTTGLAQDYSEGGGGDEASGGREYQLKDPLWPGDTLDKPPKLRIGVPRNNSFPEFVNVYNSNKLRVDGFAYNVFLRALDVLPFPLNNYKFVPLPNKSRRDNTTYDDMLCTQMKEEDLDAIIGDITIVASRINCVDFALPYLDSSVAMVVRMKNASTSGILFKPFEGLLWLTLGGIFVAATIIILILEKYKTKTNGINKIDQFLINPFLVYKMDVMEKFASSAAGWMVILTSFLFILVVQVYTANLTSILTQGRQKEPSFKDETEIIRRNLSVGYRTGSWVEGLLIHQIGFKPSQLKALGSREEYNETLSKGTKNGGVDAIFDETPYLTLFLSKYKSGFMMTGPIYKTGGFAFAFPKKSSLGLHFSNAILKVTQDAEPYHVLMARSSLPTSVEDWEFGDESHIETSKLDIDIFGGLYPVLLSVVALLLCLSIPSVIKRLRNPSLVTEWWRKKNPFKLANKA 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1787 898 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 67 869 IPR015683 -
Alju11g1787 898 SUPERFAMILY Periplasmic binding protein-like II 475 813 - -
Alju11g1787 898 Gene3D - 191 375 - -
Alju11g1787 898 MobiDBLite consensus disorder prediction 1 20 - -
Alju11g1787 898 FunFam Glutamate receptor 740 788 - -
Alju11g1787 898 SUPERFAMILY Periplasmic binding protein-like I 60 443 IPR028082 -
Alju11g1787 898 Gene3D - 59 190 - -
Alju11g1787 898 Pfam Receptor family ligand binding region 82 426 IPR001828 -
Alju11g1787 898 Pfam Bacterial extracellular solute-binding proteins, family 3 545 813 IPR001638 -
Alju11g1787 898 SMART GluR_14 481 816 IPR001320 GO:0015276|GO:0016020
Alju11g1787 898 Gene3D - 598 714 - -
Alju11g1787 898 Gene3D - 476 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1787 Alju-ChrAlju11 38379461 38385949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1787 63 818 Ion Channels AT2G29120 32.707 1.14e-108 355