Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1748 ATGGGGAATTGTTGTACTAACAATGGTCCTCGTCAATATTCACCTGAAAATGAGGCGAATGAGAAGACAGAATTTGAGAATGGAAAGGACCGAAATTCTATTTCCACATATAGTGGAGGTGAAGGGCGAGTCAGGTCAAGAGGACGCTCTAGGCTTATTTCAATGTACAGCCAGCAGGGAAGAAAAGGAGTCAACCAAGATGCAATGACAGTTCGTGAGGACTTCAATGGAGAGAAAGATATGATATTTTGTGGTGTGTTCGATGGTCACGGTCCTTTTGGGCACGTGGTTGCTCGATATATTAGCAAACAGTTACCTTCAAAGCTTGCTGCAACAATTAAAATGTCACAGCAAAAGACCTACATGAATAATGCTGCTGCAGAAGGTGAACATCTCCAAACGTTGTCCCTTGCTTCATGGGAGAACACCTTCTTGAAATCCTTCAATGAGATGGATCAAGCCATTGCTCGGGACATCAACACCGACAGTTTTTACAGTGGTAGCACTGCTGTTACTCTGATCAAACAGGGTGACCATCTGATAATTGGCAATTTGGGTGACTCTCGTGCGGTTCTTTGCACAAGAGGAGCTAGAGATCAACTCATTCCTGTTCAACTTACTGTTGACTTGAAACCAGATATTCCAAGTGAAGCTGAAAGAATCCGTAGCTGTGAAGGCAGAGTTTTCGCTGAAGAAGAAGAGCCTGATGTGTACAGAATGTGGATGCCTGATGAAGACTGCCCTGGATTGGCTATGTCAAGAGCATTTGGGGACTTTTGTTTAAAAGATTATGGCCTCATCTCAGCTCCAGATGTCTTCTATCGAAGATTAACCAGGCAGGATGAATTTGTGGTTCTGGCCACTGATGGGGTTTGGGATGCACTGACAAATGAAGAAGTCATAGAAATAGTAGCTTCAGCACCAAGGAGGTCAAGAGCAGCAAGATTGTTGGTAAAGAGAGCTGTTCAGGCATGGGGTTATAAATTCCCTGGTGCCATAGTTGATGATTGTGCTGCCATATGTTTGTTTCTGAAACACCAATCAGACTTAACCAAATCTGGGGAAAATAGGCTCAGAAGGAAGAATTACTATGAACCTGCAAGAAATGAAGACACCACAAGCTTAGATAGCTCAAGATCCAAAGATGAATGGGTTGCTATTAAAGGGTTACCCAGAGCCAACACTTTGTCCAAATTTACTGGGCTTATCAGGGATGTTAGCAGGAGGCATCCATCTCAGTTTCTTGACGGTGCTCAATTTTACTAG 1266 0.4344 MGNCCTNNGPRQYSPENEANEKTEFENGKDRNSISTYSGGEGRVRSRGRSRLISMYSQQGRKGVNQDAMTVREDFNGEKDMIFCGVFDGHGPFGHVVARYISKQLPSKLAATIKMSQQKTYMNNAAAEGEHLQTLSLASWENTFLKSFNEMDQAIARDINTDSFYSGSTAVTLIKQGDHLIIGNLGDSRAVLCTRGARDQLIPVQLTVDLKPDIPSEAERIRSCEGRVFAEEEEPDVYRMWMPDEDCPGLAMSRAFGDFCLKDYGLISAPDVFYRRLTRQDEFVVLATDGVWDALTNEEVIEIVASAPRRSRAARLLVKRAVQAWGYKFPGAIVDDCAAICLFLKHQSDLTKSGENRLRRKNYYEPARNEDTTSLDSSRSKDEWVAIKGLPRANTLSKFTGLIRDVSRRHPSQFLDGAQFY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1748 421 MobiDBLite consensus disorder prediction 1 49 - -
Alju11g1748 421 MobiDBLite consensus disorder prediction 1 16 - -
Alju11g1748 421 CDD PP2Cc 53 344 IPR001932 -
Alju11g1748 421 Pfam Protein phosphatase 2C 58 322 IPR001932 -
Alju11g1748 421 SMART PP2C_4 43 342 IPR001932 -
Alju11g1748 421 PANTHER PROTEIN PHOSPHATASE 41 342 IPR015655 GO:0004722|GO:0006470
Alju11g1748 421 SUPERFAMILY PP2C-like 48 346 IPR036457 -
Alju11g1748 421 Gene3D - 44 347 IPR036457 -
Alju11g1748 421 ProSiteProfiles PPM-type phosphatase domain profile. 52 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1748 Alju-ChrAlju11 37655370 37657841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1748 44 347 PP2C-type Phosphatase Gene Family AT5G01700 56.026 2.00e-123 361