Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1744 ATGACGACCTCCTTCACGGAACTCCTTTCCATGGATGATCGCTGGCTTTCTTCTTCTTCTTCTTCTTCTGAAATCCCTAAATTCAAGTCAACCCCACCTCCTTCCTTGCCCCTTTCTCCTTCACCTCTCTCTCCTTCTTCTTACTTGGCTTTCTCTTCTTCTGGCTTTAGCCCTACCCAGTTCTTGGCCTCTCCCTTGTTCCTTCAATCCCCAAATGTTCTTCCTTCTACTGAGACGCTTAATAACAAGGAAGAGGAGCAGAAACCATTCTTTGACTTCTCCTTCCCAACGCAACAATCCAAGCCGTCGTCTTTCGCGGAATATTCTTCCACGATGTTTCAATCGCAGGAACCACTGAAACAAGAGCCATGGAACGAGAACACAGCCAGAAAATCTGAGTATCCATCAACTCAGACCTTCTCCTCAGAACCACAGATACAAAGCAATAATAATAATATGGCTCCTGCTGCTTCGGGTTATACTAACTACTCAAATTCGTCTCAATCCATGAGAGAACAAAAGAGGACAGATGATGGGTATAACTGGAGAAAATATGGGCAGAAACAGGTGAAGGCGAGCGAAAATCCTCGAAGTTATTACAAGTGCACGCACCCGAGTTGCAACATGAAGAAGAAGGTTGAGAAGTCTCTGGATGGGCAAATTACTGAGATAGTGTATAAGGGAACACATAACCATCCCAAGCCTCAGTCCACTAGAAGATCTTCTAGTTCTCAATCAATTCAGCCTTCTTCCTCTTGTACCAATTCCGGGATTTCGGATCAATCCGCGGTGACCCTAGGGAATCTGCAGATGGAGCCGGCCTCTCTGCAAGAAGATTCTTCTGTCTCTGATGACTTTGAGCACACATCACAAACATGTTACTCTGGTGGCGGTGACAATGACTTTGGCCCTGATGCCAAAAGATGGAAAGGAGAGAATGAAATTGATGGCTATGCCTCCTCTGGGAATAGAACTGTGAGGGAACCAAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGTTATAGGTGGAGGAAATATGGTCAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGAGTTACTATAAGTGCACGGCTCAAGGGTGTTCAGTGAGGAAACATATCGAGCGAGCAGCTCATGATATGAAAGCTGTGATCACAACCTACGAAGGGAAACACAACCATGATATTCCTGCGGCACGAGGGAGTGGGAGTTATAACATGAATGCTGCTTCTCTGAACAGCAACCCCACGAGCAACATCGTAACTGCGCCTATAAGGCCATCGGCTTCGTCTGCCGCCGCGTTGACCAGCTATTCTGGCAAATCGAGTTTCACAAGTTCACTTCACAACACAAGCCAACCAACAACTACATCTGCAAGTGAAGAGCCATTCCCATTTGACATGTTTCAGAGCCCACCAAGTTTTGCATACTCTGATTTTGTTAGATCAATGGGATCATATAACCCTAATGCATAA 1491 0.4514 MTTSFTELLSMDDRWLSSSSSSSEIPKFKSTPPPSLPLSPSPLSPSSYLAFSSSGFSPTQFLASPLFLQSPNVLPSTETLNNKEEEQKPFFDFSFPTQQSKPSSFAEYSSTMFQSQEPLKQEPWNENTARKSEYPSTQTFSSEPQIQSNNNNMAPAASGYTNYSNSSQSMREQKRTDDGYNWRKYGQKQVKASENPRSYYKCTHPSCNMKKKVEKSLDGQITEIVYKGTHNHPKPQSTRRSSSSQSIQPSSSCTNSGISDQSAVTLGNLQMEPASLQEDSSVSDDFEHTSQTCYSGGGDNDFGPDAKRWKGENEIDGYASSGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAQGCSVRKHIERAAHDMKAVITTYEGKHNHDIPAARGSGSYNMNAASLNSNPTSNIVTAPIRPSASSAAALTSYSGKSSFTSSLHNTSQPTTTSASEEPFPFDMFQSPPSFAYSDFVRSMGSYNPNA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1744 496 MobiDBLite consensus disorder prediction 231 260 - -
Alju11g1744 496 FunFam WRKY transcription factor 165 236 - -
Alju11g1744 496 Pfam WRKY DNA -binding domain 177 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 Pfam WRKY DNA -binding domain 343 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 SUPERFAMILY WRKY DNA-binding domain 171 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 MobiDBLite consensus disorder prediction 275 297 - -
Alju11g1744 496 MobiDBLite consensus disorder prediction 1 29 - -
Alju11g1744 496 Gene3D WRKY domain 161 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 Gene3D WRKY domain 329 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 425 IPR044810 GO:0003700
Alju11g1744 496 FunFam WRKY transcription factor 33 329 395 - -
Alju11g1744 496 MobiDBLite consensus disorder prediction 101 170 - -
Alju11g1744 496 SMART WRKY_cls 342 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 SMART WRKY_cls 176 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 ProSiteProfiles WRKY domain profile. 171 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 MobiDBLite consensus disorder prediction 1 45 - -
Alju11g1744 496 MobiDBLite consensus disorder prediction 447 471 - -
Alju11g1744 496 MobiDBLite consensus disorder prediction 275 301 - -
Alju11g1744 496 MobiDBLite consensus disorder prediction 101 204 - -
Alju11g1744 496 SUPERFAMILY WRKY DNA-binding domain 334 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 ProSiteProfiles WRKY domain profile. 337 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1744 496 MobiDBLite consensus disorder prediction 222 260 - -
Alju11g1744 496 MobiDBLite consensus disorder prediction 447 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1744 Alju-ChrAlju11 37612165 37614251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1744 14 473 WRKY Transcription Factor Family AT2G38470 45.635 8.87e-108 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju11g1744 WRKY 2.9e-24 CL0274