Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1696 ATGGCGATCCCTCTTCAAATCTTCCCTCCTCGTAAACGACGGCCATCGGCGGCGTCATTTATCTCCCCAAAGCTCACAGAACTCGACCTCCTTCACTCTCTGCTTCATCTCACCCATGAGATTTCCTCTCTCAAACCCATCCAATTCCTCCTCAAACGCAATTCCTCTTCCATAATTCGCAAGACCAATCTTCTCTCTGTTCTCTTCGAAGAGTTTATTAGAAGTTCGATTTCTCTTTCCTTCCAATCTGTCATTCTGTGTTTCGAAGAAATGTACATAGTTCTTCAGAGGATCAAGACCTTGATCGAAGATTGCTCCAACGGAAGCAAGATGGCTCTGTTGATGCAGAATGAATCAATCGCTGATAATTTTCACAAACTTACGGCGGATTTATCGACGCTTCTGGATATATTCCCGGTGACGGAGCTTGAATTAAGCGACGACGTGCGAGAGCTTGTGATCCTGATCAGAAAACAATGCATTGACTCCAAGGCTTTTGTGGATCTGAAGGACAACGAGCTCAGGCATGAAGTTGTCACGATGCTTGATCGTATTAAGCGAGAGATCGTCCCCGATCGTTCGAAACTTGCCGATATCTTCGAAAGGTTGGAAATTCGAGATTCTTCGAGTTGCAGAGCGGAGATTGAGAGTTTAGAGGAAGAGATTCAGAATCGAAACGATGAGCAATCCAAATCTGAGCTCGTCGCTTTGATCGGACTCGTACGATACGCGAAATGCGTTCTATTCGGAGCTTCCACGGCGTCTTCTTCTTCTTCTTCCTCCTCCTCTGATGATGCTAAGCGGCGGAAACAGCCGTCGGAGATCGCTGTCCCGGCGGATTTCAGGTGCCCGATCACTCTGGACCTAATGCGCGACCCTGTTGTCGTGGCAACAGGACAGACGTACGATCGTGAGTCCATCCAACTGTGGTTCGAATCGGGGCATAACACGTGTCCCAAGACTGGTCAAACTCTGGCCCACACGGAACTCATCCTAAACCGTGCATTGAAGAATCTTATAGCGATGTGGTGCCGCGAGCAAAAGATACTGTTTGAAACCGCGGGCAGTAATGACAAACCTCACGGCGTTATCATCAACAAAGCCGCCTTAGAAGCTACTAGAATGACGGCGTCATTCTTGGTCAACAAGTTGTCTCTCTCGCCGTCCATGGAAGCCGCAAACGCCGTCGTTTATGAGCTTCGTGTTCTCGCTAAGACAGACTCTGATAGCCGAACCTGCATAGCCGAAGCCGGAGCCATCCCTCTCTTAGTTAGCTACTTGAGCTTCAATGTTGGCTCACAGAATCCAGACCTTCAAGTTAACGCCGTCACGACCATCCTCAACCTTTCCATCCTCGAGGCGAACAAAACGAGGATAATGGAGACTGACGGGGCAATAAACGGCGTCATTGAGGTCCTTCGGTCTGGAGCCACGTGGGAGGCGAAGGCCAACGCAGCCGCCACAATATTCAGCTTATCTGGCGTTCCCTCGTATAGAAGAAGACTGGGGAGGAAGACACGTGTCACTCGGGGGTTGATTGACTTGGCAAGGTGTGGGCCCACAGGTGCCAGGAGGGATGCTCTGGTGGCTATTTTGACCCTGGCGGCGGATAGAGAGACGGTGGCGAGGTTGGTGGAAGCTGGGGTTGTGGAGATGATAGCGGAAGTTATGGACGGGTTACCGGAAGAGGCGGTGACGATTCTTGAGGTAGTTGTGAAGCGGGGTGGGTTGGTGGCCGTCGCCGCCGCGTTCGGCAGCATTAAGAAATTGGGAGTTATATTGAGGGAAGGTTCTGATAGGGCCAGAGAGAGTGCGGCGGCGACACTTGCCACGATGTGTCGCAAAGGTGGGTCGGATATAGTGGCGGAGTTGGCCTCCTTGCCGGGAATTGAAAGAGTGATATGGGAATTGATGGCCATTGGGACTGTAAGAGGGAAAAGAAAAGCCGCCACGTTGTTGAGGATTCTCCGGCGATGGGCTGCCGGTTTGGACGGTGCAGGGTTAACGGAAGGATTTTCGACGGCTATCACATCGTCAACAACGATGGTTTCAACTGAATAG 2061 0.5099 MAIPLQIFPPRKRRPSAASFISPKLTELDLLHSLLHLTHEISSLKPIQFLLKRNSSSIIRKTNLLSVLFEEFIRSSISLSFQSVILCFEEMYIVLQRIKTLIEDCSNGSKMALLMQNESIADNFHKLTADLSTLLDIFPVTELELSDDVRELVILIRKQCIDSKAFVDLKDNELRHEVVTMLDRIKREIVPDRSKLADIFERLEIRDSSSCRAEIESLEEEIQNRNDEQSKSELVALIGLVRYAKCVLFGASTASSSSSSSSSDDAKRRKQPSEIAVPADFRCPITLDLMRDPVVVATGQTYDRESIQLWFESGHNTCPKTGQTLAHTELILNRALKNLIAMWCREQKILFETAGSNDKPHGVIINKAALEATRMTASFLVNKLSLSPSMEAANAVVYELRVLAKTDSDSRTCIAEAGAIPLLVSYLSFNVGSQNPDLQVNAVTTILNLSILEANKTRIMETDGAINGVIEVLRSGATWEAKANAAATIFSLSGVPSYRRRLGRKTRVTRGLIDLARCGPTGARRDALVAILTLAADRETVARLVEAGVVEMIAEVMDGLPEEAVTILEVVVKRGGLVAVAAAFGSIKKLGVILREGSDRARESAAATLATMCRKGGSDIVAELASLPGIERVIWELMAIGTVRGKRKAATLLRILRRWAAGLDGAGLTEGFSTAITSSTTMVSTE 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1696 686 Gene3D - 29 141 IPR036537 GO:0007166
Alju11g1696 686 Pfam Armadillo/beta-catenin-like repeat 408 450 IPR000225 GO:0005515
Alju11g1696 686 ProSiteProfiles U-box domain profile. 276 350 IPR003613 GO:0004842|GO:0016567
Alju11g1696 686 MobiDBLite consensus disorder prediction 253 272 - -
Alju11g1696 686 Pfam U-box domain 277 348 IPR003613 GO:0004842|GO:0016567
Alju11g1696 686 SUPERFAMILY ARM repeat 380 656 IPR016024 -
Alju11g1696 686 FunFam RING-type E3 ubiquitin transferase 273 350 - -
Alju11g1696 686 SUPERFAMILY RING/U-box 275 349 - -
Alju11g1696 686 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 353 IPR013083 -
Alju11g1696 686 CDD RING-Ubox_PUB 278 330 IPR045210 -
Alju11g1696 686 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 418 464 IPR000225 GO:0005515
Alju11g1696 686 SMART Ubox_2 280 343 IPR003613 GO:0004842|GO:0016567
Alju11g1696 686 Coils Coil 208 235 - -
Alju11g1696 686 Gene3D - 521 660 IPR011989 -
Alju11g1696 686 FunFam RING-type E3 ubiquitin transferase 363 551 - -
Alju11g1696 686 PANTHER U BOX DOMAIN-CONTAINING 53 657 - -
Alju11g1696 686 SMART arm_5 407 451 IPR000225 GO:0005515
Alju11g1696 686 Gene3D - 367 520 IPR011989 -
Alju11g1696 686 Coils Coil 686 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1696 Alju-ChrAlju11 36853682 36855742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1696 9 662 U-box Gene Family AT5G01830 59.574 0.0 749