LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju11g1693	ATGAGATTAGGAGGTATAGGCGTGGCTCAGATTCATTACGTTGAAACAGACCCATCCGGACGATATGGACGATTCAGGGATGTATTGGGGAAAGGGGCGATGAAGATAGTGTATAGAGCATTTGATGAGATGTTAGGAATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGAGATGTTTTTAATTCCCCAAATGAACTGCAACGCCTCTATTCAGAAGTTCATCTTCTCAAGAACCTTGATCATCACTCTATCATGACTTTTCACGCTTCATGGATCGATGTCCACCACCGAACCTTCAACTTCATCACCGAACTCTTCACCTCCGGCACGCTCCGAGAGTATAGGATGAAGTACTGTAGGGTAGATATTCGAGCTGTGAAGAACTGGTCTCGTCAAATTCTTAGTGGTTTGGAGTATTTGCACTGCCATGATCCTCCTGTAATACATAGAGACCTCAAGTGTGATAATATCTTTGTCAATGGCCATCTCGGGCAGATCAAGATCGGCGATTTGGGCCTCGCAGCGATCCTACGTGGCTCTCAACATGCCCACAGTGTCATAGGTACACCTGAATTCATGGCTCCAGAACTGTATGAAGAGGAATACAATGAACTGGTAGATATATACTCATTTGGGATGTGTATGATAGAGATGCTTACCTCTGAGTTTCCATACAGCGAGTGCTCTAACCCTGCACAAATATACAAGAAAGTCACTTCAGGGAGGCTACCAGATGCATTTTACAGAATCCAAGATTTGGAAGCGCAGAGATTCGTGGGAAAATGTTTGGCGAATGTGTCAAAGAGATTGCCGGCGAAGGAACTCTTGTTGGACCCCTTTTTAGCCACAGTTCAGCTCGAATCTCCGCCGCTGCTGCCACCCTGCTTGCCATCACCAAACATTCAAACTCACAAGTCCAATTCCAATAATTCAGTAGTTGCCAAGGTGCATTCTTCCTCCATAATAGCTGATCAAAGAAAGGGCACAAACATGACAATAACAGGGACAATGAATGAAGAAGATGACACAGTTTTCCTTAAAGTACAGATATCTGACAAAAATGGACATGTTAGGAACATATACTTCCCCTTTGACACCATAAATGACACTGCAATGGACGTGGCCATTGAGATGGTTAGGGAATTGGAAATAAACGACTTGGAGCCATTGGAGATAGCTCAAATGATAGAGGAAGAGATATTAGCTCTGGTTCCAACTTGGAAGGATTGGGGCCCTTCTCAGTGCCCACGTCAGCACAGCTTTACATATGAAGAAGAAGATGATGATGATGATATCAGCAACCACCATCCCTTTTTCTCATCTTCTTCACAATCTTCCTCTCATTGTTCCCTCCCAAAGCTTAGCTTCTCCAGCAAGAATAACCATGTCTCAGTTGGTCAGGATTGGCTTCAAGATGATGTCTTTCTGGACGATGCAAGCTCAGAAAGCTCAATGAACTCCTTCAAGTATGCGAACATTAATCACTGTGACATGGGCATCGAAGACGAGCATGATGCAAATTACAAGTGCTCAAGATTCTGTCCTGCAAAAGAGATGGAAGCCAGTTACAGTAGTAAGCAGATAAGCTATCGAAGAACAACGGATTGCTGCAGGAGGTGTGGTACTACTGTTCGTCGGCCAGGGAGCCTGACGAGGATGCGGTCATATGTGGATGTGAGGAGCCAGCAGTTGCAGAGATCGTTAATGGAGGAGATACACAAGAGAAGAATGTTCAATACGGTAGGTGCCATTGAGAACATTGGCTTTCAGGATCCCACAGCCACATGGAGGTCTGGCTCTTAA	1803	0.4481	MRLGGIGVAQIHYVETDPSGRYGRFRDVLGKGAMKIVYRAFDEMLGIEVAWNQVKLGDVFNSPNELQRLYSEVHLLKNLDHHSIMTFHASWIDVHHRTFNFITELFTSGTLREYRMKYCRVDIRAVKNWSRQILSGLEYLHCHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTSEFPYSECSNPAQIYKKVTSGRLPDAFYRIQDLEAQRFVGKCLANVSKRLPAKELLLDPFLATVQLESPPLLPPCLPSPNIQTHKSNSNNSVVAKVHSSSIIADQRKGTNMTITGTMNEEDDTVFLKVQISDKNGHVRNIYFPFDTINDTAMDVAIEMVRELEINDLEPLEIAQMIEEEILALVPTWKDWGPSQCPRQHSFTYEEEDDDDDISNHHPFFSSSSQSSSHCSLPKLSFSSKNNHVSVGQDWLQDDVFLDDASSESSMNSFKYANINHCDMGIEDEHDANYKCSRFCPAKEMEASYSSKQISYRRTTDCCRRCGTTVRRPGSLTRMRSYVDVRSQQLQRSLMEEIHKRRMFNTVGAIENIGFQDPTATWRSGS	600

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju11g1693	600	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	12	492	-	-
	Alju11g1693	600	Gene3D	Transferase(Phosphotransferase) domain 1	106	286	-	-
	Alju11g1693	600	FunFam	probable serine/threonine-protein kinase WNK9	106	286	-	-
	Alju11g1693	600	ProSiteProfiles	Protein kinase domain profile.	23	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju11g1693	600	SMART	serkin_6	23	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju11g1693	600	CDD	STKc_WNK	21	281	-	-
	Alju11g1693	600	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	147	159	IPR008271	GO:0004672\|GO:0006468
	Alju11g1693	600	SUPERFAMILY	Protein kinase-like (PK-like)	25	317	IPR011009	-
	Alju11g1693	600	FunFam	Probable serine/threonine-protein kinase WNK1	8	104	-	-
	Alju11g1693	600	Gene3D	Phosphorylase Kinase; domain 1	9	104	-	-
	Alju11g1693	600	Pfam	Protein kinase domain	27	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju11g1693	600	MobiDBLite	consensus disorder prediction	423	447	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju11g1693	Alju-ChrAlju11	36815583	36818528	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju11g1693	11	576	MAP Kinase Kinase Kinase	AT3G51630	57.443	0.0	604

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Alju11g1693		Pkinase	2.1e-44	CL0016