Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1687 ATGCATCGCCGTCTTCTCGACGCCGGGCTAACTGTGTCGCCGGCAGATGGAAACAAGACTCACGCATCGTTCGTCGGCGATGTGAACTTCGACGCGAACATGGTGATCATATTGGCGGCTTTATTGTCGGCATTAATATGCGCGCTTGGATTGAACTCGATAGTGCGATGTGTGTTGCTATGTAGTCGAAGATTTTCCACAGAGACCGCAGAACAAACAGCCGCAAGGCTTGCTTCAACGGGCCTGAAGAAACGTCACCTGAGCAAGATTCCGGTGAAGGAGTACGGGCCCGGGGCGAATATTCCGGCGACGGAATGTCCGATCTGCCTCGGGGAATTCGAGAAAGGAGATAAGGTGCGAATGCTGCCAAAATGTAATCACGGGTTCCATGTGAGGTGCATAGACACATGGCTTTTGTCACATTCTTCTTGCCCCAACTGTCGCCATTCGCTGCTCGATAAATCCACAAATCTGAATCCGAATTCGAATCGGAGGCGTGAAGGAGGAGGAGATATCGCCGGAGCTCAGGCTCCGACAAGTGGGTCCGGCGGCAACGTGCAAGTCCACACTGCGGTGGTCGTCGATGAGCAGGCAAGTTGA 600 0.535 MHRRLLDAGLTVSPADGNKTHASFVGDVNFDANMVIILAALLSALICALGLNSIVRCVLLCSRRFSTETAEQTAARLASTGLKKRHLSKIPVKEYGPGANIPATECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLDKSTNLNPNSNRRREGGGDIAGAQAPTSGSGGNVQVHTAVVVDEQAS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1687 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 153 IPR013083 -
Alju11g1687 199 SMART ring_2 106 147 IPR001841 -
Alju11g1687 199 SUPERFAMILY RING/U-box 90 158 - -
Alju11g1687 199 CDD RING-H2_EL5-like 105 148 - -
Alju11g1687 199 Pfam Ring finger domain 105 148 IPR001841 -
Alju11g1687 199 MobiDBLite consensus disorder prediction 155 187 - -
Alju11g1687 199 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Alju11g1687 199 PANTHER RING-H2 FINGER PROTEIN ATL78 23 162 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1687 Alju-ChrAlju11 36681526 36682125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1687 4 152 C3H Transcription Factor Family AT3G10910 58.861 8.28e-56 173