Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1674 ATGCTATGCTTTCTTCTGAAACATTTCGGCGTTTTTGTGTCTGAATATATATCTCTGAAAATGCAATTCGGCTATTTCATTTTTCTTCTTTTTGCTCCGATTCTGGTAATCTCTACCGACCCGGCGGCGTTCAACGACGATGTCTTGGGGTTGATTGTGTTCAAAGAGGGTTTAAAAGACCCAAAAGCTATGCTCTCTAGTTGGAACGAAGACGATGAAACTCCCTGCAATTGGGTCGGAGTCAAATGCGACCCGACGACCCGTAGGGTCTCTGCTTTAGTCCTTGATGGGTTTTCTCTTTCAGGGCATATTGATCGAGGATTATTGAGATTACAGTTCCTTCAAGTTCTATCACTTTCTAGAAACAACTTCACAGGGACCATAATCCCTGATCTTCCTCGCCTTTGGAGCTTGCAACTTGTTGATTTGAGCGAGAACAATCTCTCAGGATTAATCCCACAAGAATTTTTCCAGCAATGTGGGTCTTTAAGATCAGTTTCGTTTGCCAGAAACAATCTTTCAGGTAAAATTCCTGATTCTTTAAGCTCTTGCTCTATGTTAGCTACTGTTAACTTCTCCCATAATCAACTTTCTGGAGAATTGCCCTCTGGGATATGGTATTTGAGGGGATTGCAAACACTTGATCTGTCTAATAACTTGCTAGAAGGAGAGATTCCTGAGGGAATTGAGAACCAGAATGATTTGAGAGAGTTAAGTCTACAGAAGAATCGATTTATTGGTAGGATTCCTGAGGGTATTGGAGGTTGCTTGCTCTTGAAATCACTTGATTTCAGTGATAATTTTCTCTCTGGGAGACTTCCTGACTCAATGCAGAAACTTAGCTCATGCACATCTCTCAGTTTACAGGGAAATTCATTCTCAGGAAGCATTCCTGATTGGATTGGAGAGTTGAAAAATCTGGAGATATTGGACCTTTCTGCAAATTCATTCTCAGATTGGATTCCTAAATCAATAGGGAACCTTGATTCCCTGAGTAAATTAAATCTCTCAAGGAATCAACTCACAGGAAACTTGCCTGAGTCAATGAGCAATTGCATTAAGCTCTTGGCTATTGACATGAGCCACAATAAGTTATCAGGCCGCATTCCTTCATGGTTTTTTAAGATGGGTTTAAAAAGTATTTCACTTTCATGGAACAACTTCACTAAGGGCAATATTCCTACGCTTTCGTCCACATCGACGTCTTATTTTGGCCTCCAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGGTCTTCCATCTAGCATTGGGGGTCTTAGTAGCTTGCAAGTCTTAAATATGTCCACCAATAATATCTCTGGTGCTATTCCAGTGAGTATAGGAGAGCTTAAATCTTTGTTCATTCTTGACCTAAGTGACAACAAGATTAATGGAAGCATTCCTTCTGAGATAGAAGGGTTGATTTCACTGAGTGAACTGAGACTGCAGAAGAATTTCCTAAGTGGGAGAATTCCTATCCAAATCGATAAGTGTTCATCCTTGACATCTCTGAATCTTTCTCACAACAAGCTTGCTGGTTCAATCCCTTCAGCCGTTGCAAACTTACACAATCTTCAGCACATGGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGCTGACAAATCTTTCCCACCTTTTCTCCTTTAATGTTTCCTACAACCACCTTCACGGTGAGCTACCGGTGGGTGGCTTCTTCAATACTATCCCTCCCTCATCTGTCTCTGCTAATCCGTTGTTATGTGGTTCCATTGTTAATCACTCCTGCCCATCCGTTCATCCCAAACCAATTGTCCTTAATCCAAACTCTTCAGGCTCGAATTCTGGTCCTTCCTCTCAAAATCGTCGTCATAAGAAGGTCATTCTCAGTATCTCTGCCCTTATTGCTATTGGAGCTGCTGCTTTTATCACTATTGGCGTGGTGGCTATTACACTGCTAAATATACATGCACGCCACTCAATGTCACGTTCTGCTGCGCCATTTGCGCTATCCGGTGGTGAAGACTATAGTTGTTCACCCCAAAATGATCCAAACTATGGAAAACTTGTAATGTTTACCGGAGATGCTGAATTTGCTGATGGGGCTCATAATCTTCTCAATAAAGACAATGAGATTGGTCGTGGTGGATTTGGAGTTGTGTATCGCACTATTCTTCGAGACGGGCGTTCTGTTGCGATTAAAAAGCTTACTGTCTCTAGTTTGGTCAAGACCCAAGAAGACTTTGAGAGGGAAGTGAAAACACTTGGGAAGATGAGGCACCAGAATCTTGTGGCACTTGAAGGTTACTATTGGACTTCATCCTTGCAGCTTCTGATTTATGAGTACCTATCCAGAGGAAGTTTACACAAGCTTTTACATGATGAAAATACGAAAGACATCCTGTCATGGCGACAAAGGTTCAAGATTATACTTGGCATGGCAAAAGGGTTAGCCCATTTGCACCAAATGAACATAATTCACTACAATCTGAAATCAACAAATGTTCTTATTGATTGCTCTGGTGAGCCAAAAATAGGAGATTTTGGTCTGGTGAGGCTATTGCCAATGCTAGACCATTGTGTCCTGAGCAGCAAAATTCAAAGCGCGCTCGGATACATGGCGCCCGAGTTTGCTTGCCGCACGGTGAAGATAACCGAGAAATGTGATATATACGGGTTTGGGATCCTAGTTCTTGAGGTAGTGACCGGGAAAAGACCTGTGGAATATATGGAAGATGATGTGGTTGTTCTGTGTGACATGGTAAGAGGAGCATTGGAGGAAGGAAAGGCGGATCAGTGCATTGATCAGAGGCTTCTGGGAAATTTTGCTGCAGAAGAAGCAATTCCTGTGATAAAATTAGGTTTAATCTGTGCATCACAAGTGCCATCAAACCGTCCAGACATGGCTGAAGTAGTCAACATACTGGAGTTGATACAGTGCCCTTCAGAAGGACAAGAGGAAATAGAATGA 2961 0.4211 MLCFLLKHFGVFVSEYISLKMQFGYFIFLLFAPILVISTDPAAFNDDVLGLIVFKEGLKDPKAMLSSWNEDDETPCNWVGVKCDPTTRRVSALVLDGFSLSGHIDRGLLRLQFLQVLSLSRNNFTGTIIPDLPRLWSLQLVDLSENNLSGLIPQEFFQQCGSLRSVSFARNNLSGKIPDSLSSCSMLATVNFSHNQLSGELPSGIWYLRGLQTLDLSNNLLEGEIPEGIENQNDLRELSLQKNRFIGRIPEGIGGCLLLKSLDFSDNFLSGRLPDSMQKLSSCTSLSLQGNSFSGSIPDWIGELKNLEILDLSANSFSDWIPKSIGNLDSLSKLNLSRNQLTGNLPESMSNCIKLLAIDMSHNKLSGRIPSWFFKMGLKSISLSWNNFTKGNIPTLSSTSTSYFGLQVLDLSSNAFSGGLPSSIGGLSSLQVLNMSTNNISGAIPVSIGELKSLFILDLSDNKINGSIPSEIEGLISLSELRLQKNFLSGRIPIQIDKCSSLTSLNLSHNKLAGSIPSAVANLHNLQHMDLSWNELSGSLPKELTNLSHLFSFNVSYNHLHGELPVGGFFNTIPPSSVSANPLLCGSIVNHSCPSVHPKPIVLNPNSSGSNSGPSSQNRRHKKVILSISALIAIGAAAFITIGVVAITLLNIHARHSMSRSAAPFALSGGEDYSCSPQNDPNYGKLVMFTGDAEFADGAHNLLNKDNEIGRGGFGVVYRTILRDGRSVAIKKLTVSSLVKTQEDFEREVKTLGKMRHQNLVALEGYYWTSSLQLLIYEYLSRGSLHKLLHDENTKDILSWRQRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDIYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKADQCIDQRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGQEEIE 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1674 986 PRINTS Leucine-rich repeat signature 208 221 - -
Alju11g1674 986 PRINTS Leucine-rich repeat signature 138 151 - -
Alju11g1674 986 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 780 981 - -
Alju11g1674 986 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
Alju11g1674 986 CDD STKc_IRAK 709 975 - -
Alju11g1674 986 Gene3D Phosphorylase Kinase; domain 1 685 779 - -
Alju11g1674 986 Pfam Leucine rich repeat 501 560 IPR001611 GO:0005515
Alju11g1674 986 Pfam Leucine rich repeat 405 464 IPR001611 GO:0005515
Alju11g1674 986 Pfam Leucine rich repeat 284 341 IPR001611 GO:0005515
Alju11g1674 986 Pfam Protein kinase domain 704 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1674 986 SUPERFAMILY Protein kinase-like (PK-like) 703 976 IPR011009 -
Alju11g1674 986 SUPERFAMILY RNI-like 285 571 - -
Alju11g1674 986 Gene3D Transferase(Phosphotransferase) domain 1 780 984 - -
Alju11g1674 986 Gene3D Ribonuclease Inhibitor 44 322 IPR032675 -
Alju11g1674 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 207 973 - -
Alju11g1674 986 ProSiteProfiles Protein kinase domain profile. 703 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1674 986 Gene3D Ribonuclease Inhibitor 323 599 IPR032675 -
Alju11g1674 986 SMART LRR_typ_2 547 571 IPR003591 -
Alju11g1674 986 SMART LRR_typ_2 427 449 IPR003591 -
Alju11g1674 986 SMART LRR_typ_2 304 327 IPR003591 -
Alju11g1674 986 SMART LRR_typ_2 111 138 IPR003591 -
Alju11g1674 986 SMART LRR_typ_2 328 352 IPR003591 -
Alju11g1674 986 SMART LRR_typ_2 523 546 IPR003591 -
Alju11g1674 986 SMART LRR_typ_2 451 475 IPR003591 -
Alju11g1674 986 SMART LRR_typ_2 208 232 IPR003591 -
Alju11g1674 986 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 324 597 - -
Alju11g1674 986 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 45 323 - -
Alju11g1674 986 Pfam Leucine Rich Repeat 211 231 IPR001611 GO:0005515
Alju11g1674 986 Pfam Leucine Rich Repeat 259 280 IPR001611 GO:0005515
Alju11g1674 986 SMART LRR_sd22_2 304 330 - -
Alju11g1674 986 SMART LRR_sd22_2 451 477 - -
Alju11g1674 986 SMART LRR_sd22_2 523 549 - -
Alju11g1674 986 SMART LRR_sd22_2 208 231 - -
Alju11g1674 986 SUPERFAMILY L domain-like 62 389 - -
Alju11g1674 986 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 697 779 - -
Alju11g1674 986 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1674 Alju-ChrAlju11 36283672 36286733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1674 27 983 Receptor kinase-like Gene Family AT5G01890 61.618 0.0 1129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Alju11g1674 Pkinase 2e-43 CL0016