Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1651 ATGGGTTATGGTTTCGAGACGGACAAGATCACATCGTTGACCACGGCAGCCACATCTACCCACCGGTTTCGTCATGATGGAGAAAATCATTTAGCAAGCAAGTTCCTACCCACTCCATTACCTGCATTGACTTTTGGAGTTAAAATAGTTAGGGTTTCAAGCCCCCACTTGATGATTTTTTCTCATTGTATTCGTCTGAAATCTCCGGATATTGGGATGCTGGGTCCGAGATTATATGGATTTGGCCTGTTTTTTTCGTTTTTCTGTTTCATCCTCACAGCAGCAGCACAAAAGACACATCCTTCGGAAGTGAAAGCACTGGTCCAAATCAAGAAAAGTTTGATTGATCCGAAGAACCATCTGAGGAACTGGAACAAGGGCGACCCTTGTGCATCAAACTGGACTGGTGTCTGGTGTTTTAATAGGGTTGAGACTGATGGATACTTCCATGTCCATGACCTTTACTTAATGACTTCGAATCTCTCGGGAAGTCTAGCACCTCAGCTTGGTCAGCTATCGCAGCTTCAAATAATGAATTTCATGTGGAATGATCTGACAGGAACCATCCCAAAGGAGATAGGGAATATCAAATCATTGAGACTCTTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCTGATGAACTTGGCAATCTCTCAAACTTGAACAGGCTCCAACTTGACCAAAACCAACTGTCAGGTCCAATACCACAATCGTTTGCCAACTTGATCAATGTTAAACACCTCCACTTGAACAATAACTCATTTACTGGTCAAATTCCTCGTGAACTTTCAAAACTACCCAAGCTATATCATTTGCTTGTCGACAATAACAACTTTTCTGGCCATCTTCCACCAGAATTTTCCATGCTACCGGCGTTGCGCATACTCCAAGTCGATAACAATAATTTCAGTGGAAAAGAAATTCCTTCTACATATGCAAACTTTTCCAAGCTAGTAAAACTAAGTCTTAGAAACTGCAGTTTGCAAGGAGCTGTTCCTGATCTGAGTTTGATAACCGAGCTTACCTATTTGGATCTTAGCTGGAATCATCTTACTGGACCCATACCATCAAAGAAACTTTCAGATAATATGACAACTATTGACCTATCAAACAACAGGATCAACGGATCTATTTCTGGAGACATCAAATTACTTCCTTTGCTTCAAAGATTGTCACTAGAGAATAATTCTTTGTCTGGATCCGTTCCTGCCATAATATGGCTGAACTTCACTAGGATTGCTAAGCTCACAATTGATCTCCGCAATAATTCATTTTCAGACATTTCAGGCAGTTCGAGAGTACCAGCAAATGTCACCTTGAGGCTTTCTGGCAATCCTATCTGCAAGGATTCTAACATTCAAAGTATTGGTCAATATTGTGCCTCTGAAGGGGATGAATCTGAAAAATCTATGAATTCAACAACTGCTTGTCCTGCTCAAGCTTGTCCAGCGAATGATTTCTATGAATATGTCCCAGATTCCCCTGTCTTCTGCTATTGTGCAGCACCTCTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTTTCTCCTTATAGAACTGATTTTGAATTATATCTGACTCAGACTTTACATTTGGACCGACACCAATTATGGATAGACTCAATTGCTTGGGAAGTAGGACCTCGTCTTAGGATGTATTTGAAACTTTATCCCAATTACAATGATTCCCACTCTAATAAGTTCAATACAAGCGAGGTACGGCGTATTCAAGGACAATTTGGATCATGGAATTTTCCTCCCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTCCTTGGCCCTTATGAAGAGTTAATTGTTGAGACAAATAAGGGGAAGATCAGTACAACCATGTTAGTAGTTGCCATTGTTGCAGCTATTGCTTGTGCTGCCACGATCTCTGCAATTGTCACTCTCGTGATGGCCAAAAGACATGTCAAATACCGTCCCAAGCTATCCAGGAATCAGATGTCCTCTAATATTTCCATCAAAATTGATGGTGTGAAAGCATTCACTTTCAAAGAACTGGCTCATGCAACTGACAATTTCAGCAGTTCAACTGTAGTTGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGCATTCTGTTTGATAAAACAATTGTGGCTATAAAGCGAGCAGATGAAGGTTCTTTGCAAGGCCAAAAAGAATTTTTGACTGAGATTGAACTTCTGTCAAGGTTACATCATCGAAATCTAGTCTCATTGATCGGATACTGTCATGAGGAAGGAGAGCAGATTCTGGTTTACGAGTTCATGCCTAATGGTACCTTGCGGGAGTGGATTTCTGGTAAAAGGAAGGGAAACTTAAACTTTGGTATGAGGATGAGGATTGCAATGGGTGCCGCCAAGGGCATACTGTATCTCCATACCGAGGCTAACCCTCCCATATTCCACCGAGATATTAAAGCTAGCAACATACTTCTGGACCACACGCTGGTTGCTAAAGTATCTGACTTTGGACTCTCACGACTTGCACCGAGTATGGATGACGAAGGAAACATGCCTAAATATGTGTCAACAGTTGTGAGGGGAACACCAGGATACTTAGATCCGGAGTATTTTTTGACTCATAAGTTAACGGACAAAAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTCTGACAGGCATGCTTCCAATATCACATGGGAAAAACATTGTTCGTGAGGTTAATGAGGAGCTTCAGTGGGGCACGATATCTTCCATTATAGATAGCAATATGGGTTTATATCCATCAGATTGTGTGGACAAGTTTCTAAATCTTTCCCTCAGTTGTTGCCATGAGAATCAAGAGGAGAGACCATGCATGATAGATGTGGTGAGGGAGCTGGAGATTATTCTCTCAATGTTACCTGATTCTGAAACTGCTTTCCCAGACAGTGCACATGATTTTTCTGTCAAAATGGCTTCATCATCATCAGCATCATCGAAATCCTACATGGCAAGGGACAGCCAAAACATGTCCTCTCCTATGTTGTCAGGAAGCAACCTTGTCAGTGATGTTATTCCCACCATTGTTCCTCGTTAA 3078 0.4139 MGYGFETDKITSLTTAATSTHRFRHDGENHLASKFLPTPLPALTFGVKIVRVSSPHLMIFSHCIRLKSPDIGMLGPRLYGFGLFFSFFCFILTAAAQKTHPSEVKALVQIKKSLIDPKNHLRNWNKGDPCASNWTGVWCFNRVETDGYFHVHDLYLMTSNLSGSLAPQLGQLSQLQIMNFMWNDLTGTIPKEIGNIKSLRLLLLNGNKLSGSLPDELGNLSNLNRLQLDQNQLSGPIPQSFANLINVKHLHLNNNSFTGQIPRELSKLPKLYHLLVDNNNFSGHLPPEFSMLPALRILQVDNNNFSGKEIPSTYANFSKLVKLSLRNCSLQGAVPDLSLITELTYLDLSWNHLTGPIPSKKLSDNMTTIDLSNNRINGSISGDIKLLPLLQRLSLENNSLSGSVPAIIWLNFTRIAKLTIDLRNNSFSDISGSSRVPANVTLRLSGNPICKDSNIQSIGQYCASEGDESEKSMNSTTACPAQACPANDFYEYVPDSPVFCYCAAPLRIGYRLKSPSFSYFSPYRTDFELYLTQTLHLDRHQLWIDSIAWEVGPRLRMYLKLYPNYNDSHSNKFNTSEVRRIQGQFGSWNFPPTDFFGPYELLNFTLLGPYEELIVETNKGKISTTMLVVAIVAAIACAATISAIVTLVMAKRHVKYRPKLSRNQMSSNISIKIDGVKAFTFKELAHATDNFSSSTVVGQGGYGKVYKGILFDKTIVAIKRADEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCHEEGEQILVYEFMPNGTLREWISGKRKGNLNFGMRMRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDHTLVAKVSDFGLSRLAPSMDDEGNMPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTGMLPISHGKNIVREVNEELQWGTISSIIDSNMGLYPSDCVDKFLNLSLSCCHENQEERPCMIDVVRELEIILSMLPDSETAFPDSAHDFSVKMASSSSASSKSYMARDSQNMSSPMLSGSNLVSDVIPTIVPR 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1651 1025 Pfam Leucine rich repeat N-terminal domain 101 139 IPR013210 -
Alju11g1651 1025 Gene3D Ribonuclease Inhibitor 99 360 IPR032675 -
Alju11g1651 1025 PANTHER RECEPTOR-LIKE PROTEIN 55 110 965 - -
Alju11g1651 1025 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 101 262 - -
Alju11g1651 1025 Gene3D Ribonuclease Inhibitor 361 485 IPR032675 -
Alju11g1651 1025 ProSiteProfiles Protein kinase domain profile. 691 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1651 1025 Gene3D Phosphorylase Kinase; domain 1 661 766 - -
Alju11g1651 1025 ProSitePatterns Protein kinases ATP-binding region signature. 697 719 IPR017441 GO:0005524
Alju11g1651 1025 Pfam Protein kinase domain 693 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1651 1025 SUPERFAMILY L domain-like 117 456 - -
Alju11g1651 1025 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 767 976 - -
Alju11g1651 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Alju11g1651 1025 SUPERFAMILY Protein kinase-like (PK-like) 676 989 IPR011009 -
Alju11g1651 1025 FunFam Leucine-rich repeat protein kinase family protein 655 766 - -
Alju11g1651 1025 CDD STKc_IRAK 697 963 - -
Alju11g1651 1025 SMART serkin_6 691 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1651 1025 Pfam Leucine rich repeat 221 281 IPR001611 GO:0005515
Alju11g1651 1025 Gene3D Transferase(Phosphotransferase) domain 1 767 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1651 Alju-ChrAlju11 35902854 35920124 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1651 77 972 Receptor kinase-like Gene Family AT5G01950 61.641 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Alju11g1651 Pkinase 1.2e-46 CL0016