Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1646 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCCGACCAATATAAATCAGCTCAGGGGCAGTGGTTGATGCAACATCAACCTTCCATGAAGCAAATTATGGCAATCATGGCCGAAAGAGATGCAGCCATTCAAGAGAGAAATCTAGCCCTTTCTGAAAAAAAGGCAGCCCTTGCAGAGCGTGATATGGCATTCTTGCAACGAGACACTGCCATTGCAGAACGGAATAATGCCATTATGGAACGAGATAATGCAATTGCTACCCTTCAGTATCGAGAGAACTCCTTAGCCAATGGTAGCATGTCTTCTTGTCCTCCAGGATGCCAAATTGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAACAAGTACACCATTTACCTCATATGGGTGATACTTCTTACAGCACTCGGGAAATGCACACTGGTGATGACCTTCCAACAGCATCCATGCCTAATGAAGCTGGGAAATCACGGCGGGCCAAGCGACCAAAAGATGGTAAGTCAGTTTCACCTAGCAAGAAGACACCAAGAGCTGCAAAAAAAGTCAAGAGGGAGGGTGAAGACTTAAACAAGATGATGTTTGGCAAGGCGCATGAGTGGAAGAGTGGTCAGGAAATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGGGTCATCAAAGGCAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTATATGATGAGTCAACAATGCCAGCACCTGTATGCTCTTGTACTGGTGTTCTGAGACAGTGCTACAAATGGGGGAATGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTATCAATGTATCCACTACCAGCAGTACCCAACAAGAGGCATGCTAGGGTTGGTGGGCGGAAGATGAGTGGAGGTGCTTTCAATAAGCTGCTTAGCCGCCTTGCAGCAGAGGGCCATGATCTGTCAAACCCACTTGACCTGAAGGACCACTGGGCCAAACATGGCACAAACCGCTATATCACAATCAAGTAG 1014 0.4753 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSLANGSMSSCPPGCQIARGVKHVHHPQQQVHHLPHMGDTSYSTREMHTGDDLPTASMPNEAGKSRRAKRPKDGKSVSPSKKTPRAAKKVKREGEDLNKMMFGKAHEWKSGQEMVNGGDDLNKQLGSSKADWKGQDLGLNQVVYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNPLDLKDHWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1646 337 MobiDBLite consensus disorder prediction 1 21 - -
Alju11g1646 337 MobiDBLite consensus disorder prediction 1 15 - -
Alju11g1646 337 MobiDBLite consensus disorder prediction 123 189 - -
Alju11g1646 337 MobiDBLite consensus disorder prediction 158 174 - -
Alju11g1646 337 Coils Coil 51 71 - -
Alju11g1646 337 SMART GAGA_bind_2 1 337 IPR010409 -
Alju11g1646 337 PANTHER - 1 337 IPR010409 -
Alju11g1646 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Alju11g1646 337 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1646 Alju-ChrAlju11 35824836 35825986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1646 65 337 BBR or BPC Transcription factor family AT5G42520 64.384 1.03e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Alju11g1646 GAGA_bind 1.5e-107 No_clan