Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1636 ATGAGGAAGAATCAAAAGTTCGAGAAGACTATTCAGCAGGCTTTTAGAAAAGTGTATGCAGAAACGAGACCCAAGATCAAAGGCAAATTCACAAAACGATCGGAGGTGGACGGCTTTCGAGGACCAACGATGGAGGATGAAGAAGACGGCGGTTGCATGACGAAGATGGAAGAATCAAATGGTGGATGGGTCAAGCAAGCTGCCCTCTCACCTTTCATACTACAATGA 228 0.4561 MRKNQKFEKTIQQAFRKVYAETRPKIKGKFTKRSEVDGFRGPTMEDEEDGGCMTKMEESNGGWVKQAALSPFILQ 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1636 75 MobiDBLite consensus disorder prediction 34 58 - -
Alju11g1636 75 ProSiteProfiles CCT domain profile. 1 33 IPR010402 GO:0005515
Alju11g1636 75 MobiDBLite consensus disorder prediction 34 54 - -
Alju11g1636 75 Pfam CCT motif 2 33 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1636 Alju-ChrAlju11 35707833 35708449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1636 2 37 C2C2-CO-like Transcription Factor Family AT5G57660 66.667 3.70e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju11g1636 CCT 7.1e-07 CL0281