Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1627 ATGACCGCACGTGATGCGGAAGTTTTTGAACACTGTTCCAAGAAGAAAAGGAAAGGTACACAGAAGGCGAAGAATGAAATTCTGGGCCTCGGGGATAGCAACATCCCGTGCTTCTCCTTCACCACCATAACCACTCACTCCCATTGCTACTCCCTAACCAACTCCTTCCCCCCTTCTTCTTCTTCTTCGTCCTCCTTCATCTTCTTCCTCTTCTTCTTCTTGACCTCTTCAATGGGCAATTGTGGCACCAGAGAGGAATCAGCTGTTGTCTCCAATGCTCAAGTTCAACAGCCGCACATGTCGTCTTTGACTGCTAAAAGTGCTGCCGGTGAGAAGAAGCATAATGGGTCTGTGTTAGATCTGAGTGACATTTCTACCCCGCGCCATAACTTCGAGGATACTAGGAAGAATACACTACTTTATACTCATGTCATTGCTTTTACATTGTATGAGCTCGAGACTATTACTAAGAGTTTTCGCTCCGATTATATCCTTGGAGAAGGGGGGTTCGGCACTGTCTATAAAGGTTACATTGACGAGAATGTGAGAGTTGGACTCAAATCCCTTCCTGTTGCTGTCAAGGTTCTAAATAAGGAGGGTCTTCAGGGACATCGCGAGTGGCTTACAGAAGTCAATTTCTTGGGGCAGCTCAGGCATCCTAATTTGGTTAAGTTGATCGGATACTGCTGTGAGGACGATCACAGGCTACTTGTATACGAGTTCATGTTTCGAGGAAGTTTAGAAAATCATCTATTCCGAAAGGCAACTGTTCCTTTATCATGGGCTACAAGAATGATGATTGCACTTGGAGCTGCCAAGGGGCTTGCTTTTCTTCATAATGCTGAAAGGCCAGTAATCTATCGAGACTTCAAAACTTCTAATATATTGTTGGACTCTGATTATACAGCCAAGCTTTCTGATTTTGGACTGGCAAAAGCTGGACCACAAGGTGATGAAACCCATGTGTCCACCAGGGTTATGGGTACTTATGGATATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACTGCAAGGAGTGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAACTCTTAACCGGAAGGAAATCTGTTGACAAAACAAGACCGGGTAAGGAACAGAGCTTGGTGGATTGGGCTAGACCAAAGCTTAATGACAAGAGAAAGCTCCTGCAGATAATTGATCCTAGATTGGAAAGCCAATACTCAGTGAGAGCAGCACAGAAAGCCTGTAGCCTGGCTTACTACTGTTTGAGTCAAAATCCGAAAGCCAGGCCGCTAATGAGTGATGTAGTCGAGACATTGGAACCTTTACAAAGTTGTAGTGATGGTGCTGGTAAAGTCTCATCATTGGGATCAAGTGATGGAGGTGGTGGTCCCTTTGCCATGAGTGGAATCTCCGACTACCGGATGCGCCAGAGGTTTTCAAACAACGTTGGTCCAGGTGCTACTTGTCGGTCTCCAAACCCAAACTGCTCACCCGGCGCCGCCGCAGCATGCCGGGTCAGATGA 1515 0.462 MTARDAEVFEHCSKKKRKGTQKAKNEILGLGDSNIPCFSFTTITTHSHCYSLTNSFPPSSSSSSSFIFFLFFFLTSSMGNCGTREESAVVSNAQVQQPHMSSLTAKSAAGEKKHNGSVLDLSDISTPRHNFEDTRKNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLESQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCSDGAGKVSSLGSSDGGGGPFAMSGISDYRMRQRFSNNVGPGATCRSPNPNCSPGAAAACRVR 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1627 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Alju11g1627 504 CDD STKc_IRAK 165 439 - -
Alju11g1627 504 Gene3D Phosphorylase Kinase; domain 1 120 241 - -
Alju11g1627 504 PANTHER OS01G0588500 PROTEIN-RELATED 105 440 - -
Alju11g1627 504 Pfam Protein tyrosine and serine/threonine kinase 164 436 IPR001245 GO:0004672|GO:0006468
Alju11g1627 504 Gene3D Transferase(Phosphotransferase) domain 1 242 449 - -
Alju11g1627 504 SUPERFAMILY Protein kinase-like (PK-like) 134 437 IPR011009 -
Alju11g1627 504 ProSiteProfiles Protein kinase domain profile. 159 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1627 504 ProSitePatterns Protein kinases ATP-binding region signature. 165 194 IPR017441 GO:0005524
Alju11g1627 504 FunFam Probable serine/threonine-protein kinase PBL8 242 454 - -
Alju11g1627 504 FunFam Serine/threonine-protein kinase BIK1 125 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1627 Alju-ChrAlju11 35607090 35612372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1627 147 449 Glycoside Hydrolase AT3G07070 53.922 1.63e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju11g1627 PK_Tyr_Ser-Thr 6.4e-48 CL0016