Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1612 ATGGATTACTTTTGGCTTCATTGTGTTTCTAATATCTTAGATGGTCATGAGTTGAGGACACGGCAAGTGGCTATTGAAAATCTTGAGCCACAAAGAGAAAAAAGATACATGTCTGCTCAACTCAAGGAACCTCTATTCTCTGCTTCACCTTCTTCATGGAACCACAGGCTCAACAACAACAACCATACTTTCCCTCTTCACAAGTCCAGCAAAATCGAAGATAGTGATGAAGATCTGTTCAGGGTGCCGGACATGGAAGAAACGACGGCCAGCGGCGGAGAGTGTGGCGGAGGAGGGGCTGTGGTTTCAAATGGGAATGCGAAGGCAGCGGCAAGCTTAAGCAATATGACGCCTGCAGCGACAGATTCTCAGTTTCAGAGTGGAAAACGAAGAAGAGGAAGAAACCCTGCAGATAAAGAGTGCAGACGCCTCAAGAGGTTGCTAAGGAATAGGGTATCAGCGCAGCAAGCAAGAGAGAGGAAGAAGGTGTATGTGAATGAATTGGAAGGAAAAGCTAATGAGTTGCAAGACAAGAATTCCAAATTGGAAGAGCGTATCTCAACTTTGATCAATGAGAACACCATGCTTCGTAAGGTTCTTATGAACACAAGGCCTAAAGTTGACGAAAGCAGTGAACCAAAGCAGGATCAATTAAGTAAAAAATAA 666 0.4429 MDYFWLHCVSNILDGHELRTRQVAIENLEPQREKRYMSAQLKEPLFSASPSSWNHRLNNNNHTFPLHKSSKIEDSDEDLFRVPDMEETTASGGECGGGGAVVSNGNAKAAASLSNMTPAATDSQFQSGKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELEGKANELQDKNSKLEERISTLINENTMLRKVLMNTRPKVDESSEPKQDQLSKK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1612 221 Coils Coil 154 199 - -
Alju11g1612 221 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 49 216 IPR044280 GO:0000981|GO:0045944
Alju11g1612 221 SMART brlzneu 138 202 IPR004827 GO:0003700|GO:0006355
Alju11g1612 221 MobiDBLite consensus disorder prediction 202 221 - -
Alju11g1612 221 MobiDBLite consensus disorder prediction 113 141 - -
Alju11g1612 221 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 145 160 IPR004827 GO:0003700|GO:0006355
Alju11g1612 221 SUPERFAMILY Leucine zipper domain 142 201 IPR046347 GO:0003700|GO:0006355
Alju11g1612 221 Pfam bZIP transcription factor 139 198 IPR004827 GO:0003700|GO:0006355
Alju11g1612 221 CDD bZIP_HY5-like 152 193 - -
Alju11g1612 221 MobiDBLite consensus disorder prediction 127 141 - -
Alju11g1612 221 Gene3D Single helix bin 161 202 - -
Alju11g1612 221 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 140 203 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1612 Alju-ChrAlju11 35383286 35387932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1612 121 209 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 73.034 9.27e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju11g1612 bZIP_1 1.7e-12 CL0018