Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1601 ATGGCCTCGCCTCCGTCGCCTAAACCCTTCTCCCCAGTCGCCACCACTGCCTCACCCACCAAGAAGGCCCAATCAATTCCATGGACCCATCAAGAAATAGTCAATCTCATCCAAGCCTACCAAGATAAATGGTATTCTCTTGAGCGAGGTCCTCTCAAGGCCAACCAATGGGAAGAGGTCGCCGTCACTGTCGCCGTCCGATGTGGCTATGACTACAATGAGCCTTCCAAGACCGCCGTCCAGTGTCGCCACAAGATGGAAAAGCTTCGTCAACGTTATCGTGCCGAGAACCACCGTCTCGCAGCTTCTTCCTCCCGTGGCAGTCGCGTTTGGCAATACTTTGACCCCATGGACCAATTAGAGAAAGGCCCTGTGCCTATTTCTGCTCAACCCCTTGTGGCTTTCATGCCCTTTGATTATGATGATAACGAAGAGGAAAATGATGGTGATGATAGTGATGATTATGATAAATATAATGAAATTGATGAAAGACGTCAATATAGCCAGTCAAGGAGTACTGATTATTTTCTCAGCCAGCGACCTGAAAGTAGATATAGACCTGAAAGTAGATATAGAGTAGTTCCTGAATTTTCTCGGGAGCAAGTAGCTAAGAGGCTGCGGAGGGTCTCTGAGGAGGAGGAAGAGAACGTTGAGGAGGTAAATGGTGAGAGAATGGTGGAAGGAATTGGGTTGGTTTCTGGGTTAGCTGCAGAGATGAAGGCATTTGCGGAAAGGTTCATTGGGATGGAGAATTTGAAGATGGAGATGATGAAGGAAACTGAAAGGTGTAGGTTGGAGATGGAGAATAAGCGGATTGAGATGATTGTAAAATCGCAGCAGAGAATTGTTGATTCAATTGGGAAGGCTTTCGGGTTCCCTAAGAAGATGAAGATAAGTCCTGAAATCTAA 909 0.4686 MASPPSPKPFSPVATTASPTKKAQSIPWTHQEIVNLIQAYQDKWYSLERGPLKANQWEEVAVTVAVRCGYDYNEPSKTAVQCRHKMEKLRQRYRAENHRLAASSSRGSRVWQYFDPMDQLEKGPVPISAQPLVAFMPFDYDDNEEENDGDDSDDYDKYNEIDERRQYSQSRSTDYFLSQRPESRYRPESRYRVVPEFSREQVAKRLRRVSEEEEENVEEVNGERMVEGIGLVSGLAAEMKAFAERFIGMENLKMEMMKETERCRLEMENKRIEMIVKSQQRIVDSIGKAFGFPKKMKISPEI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1601 302 Gene3D - 28 95 - -
Alju11g1601 302 SMART 118neu2 35 125 IPR006578 -
Alju11g1601 302 MobiDBLite consensus disorder prediction 140 182 - -
Alju11g1601 302 Pfam Myb/SANT-like DNA-binding domain 27 120 IPR044822 -
Alju11g1601 302 FunFam Trihelix transcription factor ASIL2 28 95 - -
Alju11g1601 302 MobiDBLite consensus disorder prediction 140 157 - -
Alju11g1601 302 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 286 IPR044823 -
Alju11g1601 302 MobiDBLite consensus disorder prediction 1 25 - -
Alju11g1601 302 Coils Coil 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1601 Alju-ChrAlju11 35272643 35273551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1601 28 120 Trihelix Transcription Factor Family AT3G14180 35.484 1.78e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju11g1601 Myb_DNA-bind_4 6.3e-18 CL0123