Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1596 ATGGAAGGTCGCCGGAGGGTGACTCTTTACGATCAAATGTCATCCGTTGACGGCCGCAGTGACTCGCTTGCCGGTTCAACCCTCGAAGCAGTGATGGCAAGCCACAAGATAGCCTCCGAGCCTAGCCGCCGTCAGTTCAGCAGCACCAGCCGAACCCTCTCAGACATAATTCGAGAAGACAATTCCAACACGAAGGACAAGAAGTCTTGGAAAATCTTCAAAGACAAGCTCTGGCTCAAGCGCGCTGGATCTGCTTGGTTCTCCGCAATTCACATCCCGACCTTGGATATCTCTATCCCTAACCGGAATAACAGCAACCCCGACGCTCCGTCCACAAGTAACCCGCCCGAATTCTCAGGTCAGATCTTAACCAGAGCGCGATCTTCCCTCGGCGCCACCTCCTCCGGCGAGTCAACACATCAAACTTCTCGCCCCGACTCCTTCCGTCGAGACGGCTCGGTAACTTTCCAGGACTACTTAGACAGCGACGGCTACGGATCAGAGTGCGACGACTGGGATCCGGCGCGTGAAGGCGCGCGCCGCCTGTCCACAATTTTATCAGAGGAGAGAGCATTGTCTGCGAGGGAGGCGGAGGCTGCCGCCGCTGCATCATCGGCGGCGGCGGCACAGGGGGAAGACGAGCCGGTGAGGATGTCACTGACGCTGATGGATTTACTGGAGGAGACAGATAGGCAAATGGGGTTTGATGCGCAATACAGTACAGGATACGAAGACGACGATGAAGAAGTGTACAAGAGGATAAAAATGGAAAAGGAAGAAGATGAAGAGGAAGAGGAAGAAGAAGAAAGCAAATGGAGCGTGCAGGAAAATTGTTGTGTGTGTATGGTGAGGCATAAAGGAGCAGCATTTATACCATGTGGACACACATTTTGCAGGCAATGTTCCAGAGAGCTTTGGGTGAGTAGAGGCCATTGTCCACTCTGCAACAATGTTATTCTGGAAATTCTTGACTTGTTCTGA 981 0.5291 MEGRRRVTLYDQMSSVDGRSDSLAGSTLEAVMASHKIASEPSRRQFSSTSRTLSDIIREDNSNTKDKKSWKIFKDKLWLKRAGSAWFSAIHIPTLDISIPNRNNSNPDAPSTSNPPEFSGQILTRARSSLGATSSGESTHQTSRPDSFRRDGSVTFQDYLDSDGYGSECDDWDPAREGARRLSTILSEERALSAREAEAAAAASSAAAAQGEDEPVRMSLTLMDLLEETDRQMGFDAQYSTGYEDDDEEVYKRIKMEKEEDEEEEEEEESKWSVQENCCVCMVRHKGAAFIPCGHTFCRQCSRELWVSRGHCPLCNNVILEILDLF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1596 326 PANTHER OS01G0917900 PROTEIN 5 326 - -
Alju11g1596 326 Coils Coil 251 271 - -
Alju11g1596 326 MobiDBLite consensus disorder prediction 97 142 - -
Alju11g1596 326 Pfam Zinc finger, C3HC4 type (RING finger) 275 320 - -
Alju11g1596 326 CDD RING-HC 278 315 - -
Alju11g1596 326 ProSiteProfiles Zinc finger RING-type profile. 278 316 IPR001841 -
Alju11g1596 326 SMART ring_2 278 315 IPR001841 -
Alju11g1596 326 MobiDBLite consensus disorder prediction 97 152 - -
Alju11g1596 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 326 IPR013083 -
Alju11g1596 326 SUPERFAMILY RING/U-box 277 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1596 Alju-ChrAlju11 35219394 35220374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1596 1 326 C3H Transcription Factor Family AT3G25030 38.922 3.30e-60 191