Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1561 ATGCCCTCTTCAGTAGCTTCACTGAAAGGCCTTAAGTATCTAGATCTATCACAAAACAACTTGTCTGGATCAATACCAACAGGCCTACAAAATATTTCTGTTCTTGAATACTTGAACATTTCATTTAATGCATTAGATGGGGAAGTACCAATAGATGGGATTTTCAAGAATGCAAGTGCCATATCTGTTGCGGATAATTATAAGCTTTGTGGGGAGTATGGAATCGGTTCTGAGGTATCAACGCAGGGTGATGTTTATTCTTTTGGGATTCTAGTTTTGGAAATGCTAACTGGCAAAAGACCCACTGAAGAAATGTTCAAAGATGGTCACAATCTCCATAACTATGCAAGATCTGCATACCTAGATAACCTCTTGGACGTTGTGGACTCGGATCTTTTACAGAATAAATTAGAGCAGATTGCATCATCAAGTTTAGAGGAAATCAACATGCAGAACCAGAGCCTGATGCAATATAATGAAGAGAAGTGTATAGTTTCACTATTTAGCATTGGACTTGCTTGCTCAGAAGAATCACCCAAAGAAAGAACGAATATGATGGATATCACAAGGAGGCTAAATCTCATCAGAAATGCTTTTTGTTGTGGTGAAATGAAAGGGAATTGA 624 0.3798 MPSSVASLKGLKYLDLSQNNLSGSIPTGLQNISVLEYLNISFNALDGEVPIDGIFKNASAISVADNYKLCGEYGIGSEVSTQGDVYSFGILVLEMLTGKRPTEEMFKDGHNLHNYARSAYLDNLLDVVDSDLLQNKLEQIASSSLEEINMQNQSLMQYNEEKCIVSLFSIGLACSEESPKERTNMMDITRRLNLIRNAFCCGEMKGN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1561 207 Gene3D Transferase(Phosphotransferase) domain 1 68 197 - -
Alju11g1561 207 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 72 197 - -
Alju11g1561 207 Pfam Protein tyrosine and serine/threonine kinase 77 191 IPR001245 GO:0004672|GO:0006468
Alju11g1561 207 SUPERFAMILY Protein kinase-like (PK-like) 72 193 IPR011009 -
Alju11g1561 207 PRINTS Leucine-rich repeat signature 11 24 - -
Alju11g1561 207 PRINTS Leucine-rich repeat signature 32 45 - -
Alju11g1561 207 Gene3D Ribonuclease Inhibitor 1 67 IPR032675 -
Alju11g1561 207 Pfam Leucine rich repeat 4 45 IPR001611 GO:0005515
Alju11g1561 207 SUPERFAMILY L domain-like 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1561 Alju-ChrAlju11 33963775 33965316 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1561 5 71 Receptor kinase-like Gene Family AT3G47110 53.731 8.15e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju11g1561 PK_Tyr_Ser-Thr 2e-05 CL0016