Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1556 ATGAACAGCACAACTGGAATACAAGGGACAATTGGCTATGTTCCTCCAGAATATGGAGTAAATTCCGAGGTTTCAACAAAGGGTGATGTATATTCTTTTGGCATAGTTGTTTTGGAAATGTTAACTGGAAGAAAACCTACAGAACAAATGTTTGGAGATGACCACGATCTCCATAGCTATGTGAAAGTTGCATATCCAAATAACCTTTTGAAGATTGTAGACTCTTCTCTTCTACCAGAACAACTTCATTGGACAAATACTGCAACAAGAGAAGAAATTAGCATGGATGATGAGCTGACTCATCATTTTCATCCTAGTGACGAGAAGACTATGCTTTCATTATTTGAGATTGGACTTGCTTGCTCAGCCAAATCACCAAATGAGAGACTGAACATGATGGATGTCACTAGGAAGCTAAGCCAAATTAGTACTTTTCATATTTCGGTGAAAGAAATGGACAATGACCACAAAGCAAAGAATGGGGAGCAGTACGCTAAGAACACGAACCTCTGA 513 0.3879 MNSTTGIQGTIGYVPPEYGVNSEVSTKGDVYSFGIVVLEMLTGRKPTEQMFGDDHDLHSYVKVAYPNNLLKIVDSSLLPEQLHWTNTATREEISMDDELTHHFHPSDEKTMLSLFEIGLACSAKSPNERLNMMDVTRKLSQISTFHISVKEMDNDHKAKNGEQYAKNTNL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1556 170 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 142 - -
Alju11g1556 170 SUPERFAMILY Protein kinase-like (PK-like) 3 139 IPR011009 -
Alju11g1556 170 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1556 170 Pfam Protein kinase domain 4 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1556 170 Gene3D Transferase(Phosphotransferase) domain 1 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1556 Alju-ChrAlju11 33781105 33781742 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1556 3 142 Receptor kinase-like Gene Family AT3G47570 40.714 2.84e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju11g1556 Pkinase 1.1e-08 CL0016