Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1550 ATGGATATCATTAGCATCCTAAACTCCTTGTTCGGGAAGTTAACATTTCTCAGTTTTGCTGATAATCGTGAGTCCGTTTCAGGCTTTATTGATGATCTCAAAGCTGCCCTACAAAGACAAGGTGCAAAGGTGGAGGGTAGCTATGAAGCAAGTGGCTTCTCTCAGGAATCTTTGATATGTTCATTACTTCTTCTCCTCTTGTTTTCTTTGGCGATGATAGATATTTGGGGTTTTTCTTTTCTACCTTTCAGGTCAGAGTCTCAAGTTATTGATGACATCGTTAGATATATAATGAAGAAGCTTGGTGATGATTGTCCAATTGGCATGGAGACTCGTGTAAAAACATTTGTGAAGTTTTTAAATATAGGATCTGAGGATGATGTTGGATTTGTGGGGATTAGTGGGATGTGTGGAATAGGGAAGTCATGTCTTGCTCAAGAGGTATATGATAGAATCTGCCACAGATTTGATGCTCACTACTTTCTTCTCAAAGTTGATCAATCTATTCTTCAACAACTTGAAGAATCTCTCATGGATGACGATAATCAGCCAAGACTCTAAAGCAGAGATTTTGAGTTGGAGATATTTTTCTGTGTTGCTCGCTACTTCAATGGGAAATATAAGAGTGATGCCATCAGAATTTTAGATTCTCTCAATTTCTGTGATAATGGTCTTGGAATTCAACGTCTCCAGGAGAAATCACTCATTAACATAAGGAATGGGAAAATTTGGATGCACAATTTGTTGGAACAAGTAGGAAGGGAAGTTGCTCAACGATCATCGCTCTTTTCGAAATTCCAGGTTAAGAATTTCTTTTCTGAACTGCTTATTAAATATATAAATCAATTTGTTTCAAGTGTTATGTTGCATACATCTATTGATTATATAAGCTCACAGTATGTGGATTTGGAATTGCTCGAACAAGCCCTCCATCTTAACCATTATGCTTCAACAATACCGGCGGATTATGATAGTATCCAAGATGAGAAAGACTGCAAATACCGTGCGTTTATCAGTTTGGCTGATGACGACAATGACTCTTTTTCAACTTTTATTCAACATCTTATTGCTGCTCTACGAAGAGTAGACATCTCCACTTCTAGTGCAGATAGAAGAACGGTGAAAACAGCAGAATTCAGTGTGGCGTCTGAGGAACTGGCAAAGATTAGTGCTCAACGCATAGTTATTCCTATTTTCTACCGTGTATCTCCAGCTAAGGTACAAAACCAGAGCAGCTATTTCCAAGGGACCTTTGCTAAACTTGAGGAAAAATTCAGAGACAGTTTGAAGCAGGTAGAAAGCTGGAGGGAAGCTATGAGACAAGTGGCTTCTCTCAGGGGTTGGCGTGCATGGATTGGGACAGAGTCTCAAGTTATTGATGGCATTGTTAAACATATAATGAGGATATTTGATCATAATGATTTAGTTGGGATGGACGCTCGTGTGGAAGCATTTCAAGACCTTCTAAATATAGCATCTGATGATGATGTTGGATTTGTAGGGATTAGTGGGATGTGTGGGATAGGGAAGACATGTCTTGCTCAAGAGGTCTATGAAAGAATCTACCTCAGATTCGATGCTCATTGTTTTCTTTACAATAATGATTCTCTACTCATTCTACAACAGCGACTTCGGGAATCTCTCATAGATGATAATAATCAGCCAAGATACTGTTTTGAGAAAGTCTTGAACTTTGATTCTGTGGAGAATACTTTAGAAGTGGAGCTTAATTGA 1734 0.3852 MDIISILNSLFGKLTFLSFADNRESVSGFIDDLKAALQRQGAKVEGSYEASGFSQESLICSLLLLLLFSLAMIDIWGFSFLPFRSESQVIDDIVRYIMKKLGDDCPIGMETRVKTFVKFLNIGSEDDVGFVGISGMCGIGKSCLAQEVYDRICHRFDAHYFLLKVDQSILQQLEESLMDDDNQPRLXSRDFELEIFFCVARYFNGKYKSDAIRILDSLNFCDNGLGIQRLQEKSLINIRNGKIWMHNLLEQVGREVAQRSSLFSKFQVKNFFSELLIKYINQFVSSVMLHTSIDYISSQYVDLELLEQALHLNHYASTIPADYDSIQDEKDCKYRAFISLADDDNDSFSTFIQHLIAALRRVDISTSSADRRTVKTAEFSVASEELAKISAQRIVIPIFYRVSPAKVQNQSSYFQGTFAKLEEKFRDSLKQVESWREAMRQVASLRGWRAWIGTESQVIDGIVKHIMRIFDHNDLVGMDARVEAFQDLLNIASDDDVGFVGISGMCGIGKTCLAQEVYERIYLRFDAHCFLYNNDSLLILQQRLRESLIDDNNQPRYCFEKVLNFDSVENTLEVELN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1550 577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 547 IPR027417 -
Alju11g1550 577 SUPERFAMILY Toll/Interleukin receptor TIR domain 329 448 IPR035897 -
Alju11g1550 577 Pfam TIR domain 384 471 IPR000157 GO:0007165
Alju11g1550 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 376 551 IPR044974 GO:0006952
Alju11g1550 577 Pfam NB-ARC domain 114 175 IPR002182 GO:0043531
Alju11g1550 577 Gene3D - 373 466 IPR035897 -
Alju11g1550 577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 182 IPR027417 -
Alju11g1550 577 Gene3D - 102 242 IPR027417 -
Alju11g1550 577 Gene3D - 467 577 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1550 Alju-ChrAlju11 33606829 33611526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1550 393 527 WRKY Transcription Factor Family AT4G12020 31.884 1.06e-14 75.9