Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1518 ATGGTAAGCTTGAGAAGGCGCAGACTTTTGGGGCTATGCTCAGGAAACAGTTCCTTTGTTACTCCACTTCCGCTATATTGTGAGAACCTCACTGCTTCTCGAGATTCAGCTCAGCATGCTAAACCTAAGACCGCCCAATCTGACAATGGAATTGGAAGCATCCTACATGGTATAGGAACTCAACTACTAAAACAGAATCCCATTGTGAAAGAAGAACCAGCTTCCTCAAATGTATCTGGCTCTAGCTCGTCAAAGGAGCAGTCTACTCAGCTGTTTATTGGGCCTCCTATTAAACGCAGAAAGCCACACAGGAGAAAGAATATGCATAGTCAAGAATCATGTGTAATGAGAGGCGTCTACTTTAAAAATATGAAGTGGCAGGCAGCAATTAAAGTGGACAAGAAACAGATCCATCTTGGAACTGTTAATTCTCAAGAAGAGGCTGCTCGACTATATGACAGGGCAGCTTTCATGTGTGGGAGGGAGCCCAACTTTGAGCTTTCAGACAAAGATAAGCAAGAACTAAGTAAATTGCAATGGGATGAGTTCTTGGCATTTACTCGACAAACAATCACCAGTAAAAAACACAAAAGAAGACTTGGCGCTAGGCTGCGCAGTGAGTCTGAGCCACCTACATCTCATGACGGGGACAGTCAGCTAGGCGTCGCTGCCACCTCAGCTTCAGATGATGCTGATCAGGAAACATCAGACTCATGA 717 0.4477 MVSLRRRRLLGLCSGNSSFVTPLPLYCENLTASRDSAQHAKPKTAQSDNGIGSILHGIGTQLLKQNPIVKEEPASSNVSGSSSSKEQSTQLFIGPPIKRRKPHRRKNMHSQESCVMRGVYFKNMKWQAAIKVDKKQIHLGTVNSQEEAARLYDRAAFMCGREPNFELSDKDKQELSKLQWDEFLAFTRQTITSKKHKRRLGARLRSESEPPTSHDGDSQLGVAATSASDDADQETSDS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1518 238 SUPERFAMILY DNA-binding domain 115 160 IPR016177 GO:0003677
Alju11g1518 238 MobiDBLite consensus disorder prediction 70 110 - -
Alju11g1518 238 MobiDBLite consensus disorder prediction 213 231 - -
Alju11g1518 238 MobiDBLite consensus disorder prediction 193 238 - -
Alju11g1518 238 SMART rav1_2 117 172 IPR001471 GO:0003700|GO:0006355
Alju11g1518 238 Gene3D AP2/ERF domain 116 167 IPR036955 GO:0003700|GO:0006355
Alju11g1518 238 MobiDBLite consensus disorder prediction 70 91 - -
Alju11g1518 238 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 203 - -
Alju11g1518 238 FunFam ethylene-responsive transcription factor-like protein At4g13040 116 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1518 Alju-ChrAlju11 32824573 32829802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1518 68 189 AP2-EREBP Transcription Factor Family AT1G72570 25.899 3.83e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju11g1518 AP2 8.6e-05 CL0081