Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1487 ATGAGTTGTTGGTCACCAGCATCTGTTTTTACTAATCAACTTATACCACTGTCTGCTGCAAGCACCAAATCTAATGTTAATATCAAAAGAAGCACCATTTTTATATGCAGCCCAAGTCAAGGAAGGTGCTATCTCTCTGTTTCTGAGAGCCATCATAAAGTCGGGAGACTCAGAATTTTTGGGGTAGTTATATCTGGACAAGGATTTACGCAATTTCAGGCGCAACAAGGAACTTGGGAAGGACCTGATGATGGCAGCGGTAGTGAGTATGATGAAGAAGAAGAAGATGAGGAAACAGAAGATGAGAACTATGGCTTTGAAAGTGATTGGGAAGAGGAGGAGATAACGTCATCAGCTGTTAATGGTGTTATTTCAGCGGACAAGTTTGGGGAGGATATTAAAACAGAGGTCGAACAGCTTTTGGAGCCTGAAGAAAGAGCAGTCTTGCAACAGAATGTGACTCCAAACTTGGAAAAAATTTCAACTGAAAAATGGAGCCCACTGCACACTTTAGCGCTATCAACACAGATAAGATGCATGGATCAGCTGCTTGAAAGTGGTGTTGCTATTGATCTTAAGAACAAGGAAGGTCTCACCGCACTTCATATAGCTATTATAGGAAAGAAAGAAGCTGTAATAAGCCATCTTTTACGTAAAGGTGCAAGTCCTCATGTCAGGGATAAGGATGGTGCCACCCCGCTTCATTACGCAGTTCAAGTTGGTGCCAAGCAAACTGTAAAGTTATTGATCAAATATAAAGTTGACGTCAACGTTGCAGATAATGAAGGTTGGACCCCATTGCACGTTGCTATTCAAAGCAGAAATAGAGATATTGCAAAAATTTTGTTAGTCAATGGTGCGGATAAGACAAGAAGAAATAAGGATGGGAAAACAGCATTGGATCTAAGTTTATGTTATGGGAAGGACTTCAAGTCTTATGACCTTGGCAAATTATTGAAGGTAGTTCCAGCTGACACTGATTATTGA 987 0.4063 MSCWSPASVFTNQLIPLSAASTKSNVNIKRSTIFICSPSQGRCYLSVSESHHKVGRLRIFGVVISGQGFTQFQAQQGTWEGPDDGSGSEYDEEEEDEETEDENYGFESDWEEEEITSSAVNGVISADKFGEDIKTEVEQLLEPEERAVLQQNVTPNLEKISTEKWSPLHTLALSTQIRCMDQLLESGVAIDLKNKEGLTALHIAIIGKKEAVISHLLRKGASPHVRDKDGATPLHYAVQVGAKQTVKLLIKYKVDVNVADNEGWTPLHVAIQSRNRDIAKILLVNGADKTRRNKDGKTALDLSLCYGKDFKSYDLGKLLKVVPADTDY 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1487 328 ProSiteProfiles Ankyrin repeat profile. 196 228 IPR002110 GO:0005515
Alju11g1487 328 ProSiteProfiles Ankyrin repeat profile. 163 195 IPR002110 GO:0005515
Alju11g1487 328 MobiDBLite consensus disorder prediction 73 109 - -
Alju11g1487 328 Gene3D - 231 309 IPR036770 -
Alju11g1487 328 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 136 320 - -
Alju11g1487 328 SUPERFAMILY Ankyrin repeat 155 307 IPR036770 -
Alju11g1487 328 Pfam Ankyrin repeats (3 copies) 211 293 IPR002110 GO:0005515
Alju11g1487 328 ProSiteProfiles Ankyrin repeat region circular profile. 229 261 - -
Alju11g1487 328 ProSiteProfiles Ankyrin repeat profile. 229 261 IPR002110 GO:0005515
Alju11g1487 328 Gene3D - 129 230 IPR036770 -
Alju11g1487 328 ProSiteProfiles Ankyrin repeat region circular profile. 262 288 - -
Alju11g1487 328 MobiDBLite consensus disorder prediction 85 109 - -
Alju11g1487 328 ProSiteProfiles Ankyrin repeat region circular profile. 196 228 - -
Alju11g1487 328 ProSiteProfiles Ankyrin repeat profile. 262 294 IPR002110 GO:0005515
Alju11g1487 328 SMART ANK_2a 196 225 IPR002110 GO:0005515
Alju11g1487 328 SMART ANK_2a 229 258 IPR002110 GO:0005515
Alju11g1487 328 SMART ANK_2a 262 291 IPR002110 GO:0005515
Alju11g1487 328 SMART ANK_2a 163 192 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1487 180 288 Ion Channels AT2G25600 31.429 3.46e-10 59.3