Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1485 ATGCAGGGATTGAAGAAGAAGCTCCTTAAGGAAGGTGAAGGCTGGGACACACCTGAAGTGGGCGATGAAGTCGAAGTTCATTACACGGGAACGCTGCTTGATGGGACCAAGTTTGATTCGAGCCGCGACAGAGGGAACCCCTTTAAGTTCACGCTTGGACAAGGGCAAGTAATTAAAGGATGGGATCAGGGTATTAAGACCATGAAGAAAGGTGAAAATGCCATTTTCACCATCCCTGCTGAACTAGCTTATGGTGAATCTGGTTCTCCTCCAACTATTCCTCCAAATGCTACTCTTCAATTTGATGTTGAGCTTCTGTCTTGGACCAGCGTGAAAGACATATGCAAGGATGGTGGCATATTGAAGAAAATACTTACTGAAGGAGAGAAATGGGAGAACCCCAAAGATCCTGATGAAGTTTTAGTTAAATATGAAGCTCATCTTGAAGATGGAACACTTGTATCAAAATCTGATGGAGTGGAGTTTACTTTGAAGGAGGGTTACTTTTGTCCTGCGTTCGCAAAGGCTGTGAAAACCATGAAGAAGGGAGAGAAAGTGCTTTTAACTGTGATGCCGCAATATGGTTTTGGTGAGAAGGGTAAAGCGGCACATGGTGATGAAGGTGCAGTTCCACCAAATGCATCCTTGCAGATAACTCTTGAATTGGTATCTTGGAAGACTGTTTCAGAAGTAACTGATGATAAGAAGGTTATTAAAAAAATCCTCAGTGAAGGGGAAGGATATGAGCGTCCAAATGAAGGAGCTGTTGTGAAAGTGAAATTGATTGGCAAACTGCAAGATGGCACTGTCTTCATGAAGAAGGGCCATGATGAAGAGCTGTTTGAATTCAAAACAGATGAAGAGCAAGTCATTGATGGACTTGATAAAGCTGTCTTAACTATGAAAAAGGGTGAAGTAGCCTTGTTGACTGTTGCTCCTGAGTATGCCTTTGGTTCATCCGAGTCCAAACAAGAATTGGCTGTTGTTCCTCCCAACTCAACTGTTTACTATGAAGTCGAACTAGTATCATTTGTGAAGGAAAAGGAGTCCTGGGACATGAACACACAGGAGAAGATTGAAGGTGCTGGTAAAAAGAAAGAAGAAGGAAATGCGTTGTTTAAGAGTGGAAAATATGCTAAAGCTTCTAAAAGATATGACAAGGCTGCCAAGTACGTAGAGTATGATTCCTCCTTCAGTGAAGAGGAGAAGAAGCAGGCTAAGGCACTGAAGGTTGCTTGCAACCTGAACAATGCGGCTTGCAAGTTGAAGTTGAAAAATTACAAAGAAGCTGAGAGATTGTGTACCAAGGTTCTGGATCTTGAAAGCACAAACGTTAAGGCACTTTATAGAAGAGCACAGGCCTTTATCGAGTTGGCTGACTTGGATTTGGCAGAATCTGATATTAAGAAAGCTCTTGAGATAGACCCTGACAACAGGGATGTGAAGCTGGAGTACAAGACTTTGAAGGAAAAGGTGAAGGAGTATAACAGAAAGGAGGCTAAATTTTATGGAAACATGTTTGCCAAGATGACTAAGGCGGATTCAAATGACAATAATAAAGCAGCAGCGAACAAGGATGCTGAACCTATGAGCATTGACAGCAAAGCATAA 1611 0.4221 MQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRGNPFKFTLGQGQVIKGWDQGIKTMKKGENAIFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGILKKILTEGEKWENPKDPDEVLVKYEAHLEDGTLVSKSDGVEFTLKEGYFCPAFAKAVKTMKKGEKVLLTVMPQYGFGEKGKAAHGDEGAVPPNASLQITLELVSWKTVSEVTDDKKVIKKILSEGEGYERPNEGAVVKVKLIGKLQDGTVFMKKGHDEELFEFKTDEEQVIDGLDKAVLTMKKGEVALLTVAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKEKESWDMNTQEKIEGAGKKKEEGNALFKSGKYAKASKRYDKAAKYVEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKNYKEAERLCTKVLDLESTNVKALYRRAQAFIELADLDLAESDIKKALEIDPDNRDVKLEYKTLKEKVKEYNRKEAKFYGNMFAKMTKADSNDNNKAAANKDAEPMSIDSKA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1485 536 SMART tpr_5 411 444 IPR019734 GO:0005515
Alju11g1485 536 SMART tpr_5 362 395 IPR019734 GO:0005515
Alju11g1485 536 SMART tpr_5 445 478 IPR019734 GO:0005515
Alju11g1485 536 SUPERFAMILY FKBP-like 113 228 - -
Alju11g1485 536 Gene3D - 1 112 IPR046357 GO:0003755
Alju11g1485 536 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 254 345 IPR001179 GO:0003755
Alju11g1485 536 FunFam Peptidylprolyl isomerase 113 226 - -
Alju11g1485 536 Gene3D Tetratricopeptide repeat domain 348 505 IPR011990 GO:0005515
Alju11g1485 536 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 21 109 IPR001179 GO:0003755
Alju11g1485 536 Coils Coil 478 498 - -
Alju11g1485 536 FunFam Peptidylprolyl isomerase 350 505 - -
Alju11g1485 536 SUPERFAMILY TPR-like 350 510 IPR011990 GO:0005515
Alju11g1485 536 FunFam Peptidylprolyl isomerase 227 347 - -
Alju11g1485 536 ProSiteProfiles TPR repeat profile. 445 478 IPR019734 GO:0005515
Alju11g1485 536 PANTHER PEPTIDYLPROLYL ISOMERASE 3 110 - -
Alju11g1485 536 Gene3D - 227 347 IPR046357 GO:0003755
Alju11g1485 536 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 17 106 IPR001179 GO:0003755
Alju11g1485 536 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 248 342 IPR001179 GO:0003755
Alju11g1485 536 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 132 222 IPR001179 GO:0003755
Alju11g1485 536 SUPERFAMILY FKBP-like 2 113 - -
Alju11g1485 536 FunFam Peptidylprolyl isomerase 1 112 - -
Alju11g1485 536 MobiDBLite consensus disorder prediction 514 536 - -
Alju11g1485 536 SUPERFAMILY FKBP-like 231 363 - -
Alju11g1485 536 Pfam Tetratricopeptide repeat 446 478 IPR019734 GO:0005515
Alju11g1485 536 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 137 226 IPR001179 GO:0003755
Alju11g1485 536 Gene3D - 113 226 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1485 Alju-ChrAlju11 32142376 32146950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1485 2 510 Calmodulin-binding Proteins AT3G25230 82.779 0.0 865