Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1483 ATGGAAAACGATTTCTTTCTAAATGCTTCAGCTCTTCACTTCGAGCCTCCTTCGTCTTCTTCTCCTTCATTACCCACTTGGCATTCTCTCTCCTCCGCCGCCATGGATATTCCAGTTTCCTCCGACCAACCTCAACAACAACGAGACTGTTTCTACAATCCCTCGTGGGAAATGTCAACCGTCGATCATAATCATCATCATCACGCTCTTCAGTTCGATTCGGCGTTGAGTTCAATGGTTTCTTCTCCGGCAGCTTCCAATTCGAACTTGTCCAACGACAATTTCATCATCAGAGAACTGATTGGGAAATTGGGCACTATTGGGAACACGGGCGAGATCTCTTCTTACATGAATGGAAATAATAACAGTACCAACACTTCATGTTACAGCACGCCTTTGAGTTCTCCTCCTAAACTGAACATTCCTCCTCCATTAATGAAAGACAAATTACCAATGGCTTTGAATTCCAGTGTGGCTGAATTCTCAGCTGATCCTGGTTTTGCTGAGAGAGCTGCCAAGTTTTCTTGCTTTGGAAGTAGGAGCTTTAATGGAAGAAGTTCAAGACAAGTTGGGATTAATAATAATGCTGACTTCACTCACAGATCTAGTCCATTAATGGAAAATGCTAAGCTTTCTAGAGTTTCAAGTAGTCCATCGTTGAAAGCACTTGGATCTCAAATGGAAAATAAGAATTCTCCTTTGAATTCTCAGGAGGAATCTACAATCTCTGAGCAAAACCCAAATGGCGAATCTGGTGTTAAACCTTCCCCTCCTGATATGAATTCCAGAAAGAGAAAAGTTTCTTCTAAGGGAAAACCCAAAGAAAATCCTACCAAGGCTGCTGAAGGTAATGAAGATTCAAGTGCAAAACGAAGCAAGCCAAATGAAGGGGAAGTACATGAAAATGGTCAAGTGAAGGGAGAAGAAGAGTCAAAAGGAGGTAGCAACAATGGAGGGGATGAGAAACAGAGCAAAAGCAACAACTCAAAACCTCCTGAGCCTCCAAAGGACTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACAGATAGCCATAGTCTTGCTGAAAGAGTAAGAAGGGAGAAAATCAGTGAAAGAATGAAGCTTCTGCAAGATATTGTACCTGGTTGCAACAAGGTCACTGGAAAAGCTCTTATGCTTGATGAAATCATAAACTATGTACAGTCATTGCAGCGTCAAGTTGAGTTCCTTTCTATGAAATTGGCCTCCGTGAACACCAGGCTTGATGTGAGCATTGACAATCTCATCTCAAAAGATATATTTCAATCAAATAACTCTTTGGCACACCAGGCAGCAATATTCCCCTTAGATTCCTCTGCCACAGCCTTTTTTGGCCCCAACCCAGCAATCCACAATACAATCCCTAATGGAACTGTGACCCACCCAATGGAATCTTTAGATTCTGCTCTCTGTCAAAGCCTTGGCTTCCAGTTACCACCTCTGAATGGTTTCAATGAAGGTGCTTCTCAGTATCCAATGACTTTTTGTGAGGAGGACCTCCATGCCATTGTTCAGATGGGGTTTGGTCAAACAGAAAATAGAAAAACACCAACACAATCTCCAAGCTTTAATGGTTCAAGCCAGATGTCCCACATGAAAGTTGAGCTCTGA 1632 0.424 MENDFFLNASALHFEPPSSSSPSLPTWHSLSSAAMDIPVSSDQPQQQRDCFYNPSWEMSTVDHNHHHHALQFDSALSSMVSSPAASNSNLSNDNFIIRELIGKLGTIGNTGEISSYMNGNNNSTNTSCYSTPLSSPPKLNIPPPLMKDKLPMALNSSVAEFSADPGFAERAAKFSCFGSRSFNGRSSRQVGINNNADFTHRSSPLMENAKLSRVSSSPSLKALGSQMENKNSPLNSQEESTISEQNPNGESGVKPSPPDMNSRKRKVSSKGKPKENPTKAAEGNEDSSAKRSKPNEGEVHENGQVKGEEESKGGSNNGGDEKQSKSNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDIVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDVSIDNLISKDIFQSNNSLAHQAAIFPLDSSATAFFGPNPAIHNTIPNGTVTHPMESLDSALCQSLGFQLPPLNGFNEGASQYPMTFCEEDLHAIVQMGFGQTENRKTPTQSPSFNGSSQMSHMKVEL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1483 543 MobiDBLite consensus disorder prediction 518 543 - -
Alju11g1483 543 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 415 IPR036638 GO:0046983
Alju11g1483 543 MobiDBLite consensus disorder prediction 185 204 - -
Alju11g1483 543 SMART finulus 353 403 IPR011598 GO:0046983
Alju11g1483 543 MobiDBLite consensus disorder prediction 259 316 - -
Alju11g1483 543 Pfam Helix-loop-helix DNA-binding domain 351 398 IPR011598 GO:0046983
Alju11g1483 543 Coils Coil 394 414 - -
Alju11g1483 543 FunFam Basic helix-loop-helix transcription factor 344 416 - -
Alju11g1483 543 MobiDBLite consensus disorder prediction 317 331 - -
Alju11g1483 543 MobiDBLite consensus disorder prediction 210 252 - -
Alju11g1483 543 MobiDBLite consensus disorder prediction 210 338 - -
Alju11g1483 543 CDD bHLH_AtBPE_like 337 422 - -
Alju11g1483 543 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 397 IPR011598 GO:0046983
Alju11g1483 543 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 232 440 IPR024097 GO:0006355
Alju11g1483 543 Gene3D - 344 420 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1483 Alju-ChrAlju11 32081228 32083907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1483 1 497 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 46.094 4.00e-115 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju11g1483 HLH 5.3e-06 No_clan