Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1443 ATGAATGGCAGCCGTAACTATAACGATCATAAGGACCTACAGGCCAAGGGACAGTCTCGGGTAGACAATTTCTATAGGGCCTCTTCGCCACCTGGGGCTGTAGTATATTCCAAGGGTTGGGCTGTTAGCCCATTAAAGCTGTGCATGAGCTGGGTTCAGAACGTCGTTAGACAGTTTGTTGAAAGAGAGAGGCTACACCGTAAAGAGAAGAATAAGCTAGCGAGTATGAGCAGCACCATGGAGAATAATGAAGAATATGATGTTTCTCTTAATGCTATGCTGCTAGCAAGTGGCCAGCTTTACCCAGCAGGGTTAAATGCTGCCATTGAACTCAACCTCTTTAAGATCATTGGTGAGGGAAATCCAAAGGGCATGTCACCCTCTGAAATTGTTTCTCAGCTTCCAAACCCACACGCTGGCCGGTGGCAACAACACTGTCGGCCGCCTCGATCGATTGCTCCGTTTGGTTGCTACTCATTCTATTTTGAATTGTTCTTCCAACAAGGTTGA 510 0.4686 MNGSRNYNDHKDLQAKGQSRVDNFYRASSPPGAVVYSKGWAVSPLKLCMSWVQNVVRQFVERERLHRKEKNKLASMSSTMENNEEYDVSLNAMLLASGQLYPAGLNAAIELNLFKIIGEGNPKGMSPSEIVSQLPNPHAGRWQQHCRPPRSIAPFGCYSFYFELFFQQG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1443 169 Pfam Dimerisation domain 105 139 IPR012967 GO:0046983
Alju11g1443 169 Gene3D - 70 143 IPR036388 -
Alju11g1443 169 SUPERFAMILY "Winged helix" DNA-binding domain 84 137 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1443 Alju-ChrAlju11 30297586 30301801 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1443 87 139 Monolignol Biosynthesis Gene Families AT5G54160 46.429 7.97e-06 43.1