Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1393 ATGGGCTCTAAGTTGAAGAAACTCAAAGATGAAGAAGCAGAAGATAACGTACTGTTACATCAAAGCGAGACAATACCATTGTCATCGCCGCCCTCATACGGGTTCTTGGAGCCACCATGGCCCTCCCATGTGGAGGAGGACAACGGCGAGGAAGAAGAAGTTGTGTATTCAGACAAGGTGAAAGTGCAGATATTTGACTCAGAGTCTTCTTCTTCCAACAACTCCACCATGGCGGTGCCGCCATTCTCGTGGCGGAAGTTGTGGCTGTTTACGGGGCCGGGGCTGTTGATGAGCGTGGCGTTTTTGGACCCTGGGAATTTGGAGGGTGATTTGCAGGCAGGAGCCATTGGAGGGTACTCGTTGTTGTGGCTTTTGATGTGGACAACGATCATGGGGCTTCTGATACAGCTGTTGTCGGCTAGGCTCGGGGTGGCAACGGGGCGGCACTTGGCGGAGCTGTGCCGGGAAGAGTACACCAAGTGGGCGAGGATGGTGTTGTATGTGATGGCGGAAATGGCATTGATAGCTGCAGATATTCAAGAGGTTATTGGTAGCGCCATAGCCATTAAAATTCTAAGTCATGGCATTTTGCCCATTTGGGCTGGAGTTGTAATCACAGCCCTGGATAGTTTTGTCTTCCTGTTTCTCGAGAACTATGGAGTGAGGAAGCTGGAAGGTGTTTTCGCAATATTCATTGGAACTATGGCCCTCTCTTTTGCTTGGATGTTCTTTGATACAAAACCTAGTCCTAAACAACTTCTTATAGGTATTTTGGTCCCAAAAGTAAGCTCAAAAACTCTTCGTCAAGCTGTGGAACTTATAGGCTGTGTTATAACCCCACACAACGTATTCTTGCACTCAGCCCTAGTTCAATCCAGAGATATAGACATACAAAACAAAAGCCAAGTCCAAGAAGCTATAAACTACTACACAATCGAGTCCACACTCGCACTTATCATCACCTTCTTCATCAACCTATCGGTCATGACCGTCTTCGCTAGGGTTTTCTACGGCAACACTGAACAAGCCGACACCATCGGGCTCGTAAACGCCGGCCAGTATCTTCAAGAGAAATACGGCAGAGGGTTCTTCCCTATATTGTATATATGGGGAATAGGGTTGCTGGCTGCCGGGCAAAGTAGTACTATCACTGGTACTTATGCTGGGCAGTTTATTACAGAAGGGTTTCTGAAACTGCGTTTGAAGAAATGGTTAAGGGCTTTGATCACTAGAAGCCTAGCTATTGTTCCTACCATGATTGTGGCTGTTTTGTTTAATACTTCTGAAGGTTCTTTGGATACTTTGAATGAGTGGCTTAATGTGGTTCAGTCTATTCAGATACCTTTTGCTCTTATTCCTCTTCTTACGTTGGTGTCTAGAGAGGAGGTCATGGGGACTTTCAGAATTGGGCCTCTGGTGGAGAAAGTGGCATGGACAGTGGCAGTGGTGGTAATTCTGGTATATGGATACATGTTGCTGGACTTCTTTCTATCAGAAGTGAAAGGACTTGTGTATGGCTTTGTGGTGATGAGTTGTGCAGCTGCTTGGTTATCATTCATTGCTTATTTGGTTAAACACAGTGGTGCCTTCTCTTCTTTCTTCCACACTTCTCTTCATTCTCGTGGCTTCTCCTCTCTTTCTCCCAATTAA 1650 0.4618 MGSKLKKLKDEEAEDNVLLHQSETIPLSSPPSYGFLEPPWPSHVEEDNGEEEEVVYSDKVKVQIFDSESSSSNNSTMAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIGGYSLLWLLMWTTIMGLLIQLLSARLGVATGRHLAELCREEYTKWARMVLYVMAEMALIAADIQEVIGSAIAIKILSHGILPIWAGVVITALDSFVFLFLENYGVRKLEGVFAIFIGTMALSFAWMFFDTKPSPKQLLIGILVPKVSSKTLRQAVELIGCVITPHNVFLHSALVQSRDIDIQNKSQVQEAINYYTIESTLALIITFFINLSVMTVFARVFYGNTEQADTIGLVNAGQYLQEKYGRGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLRLKKWLRALITRSLAIVPTMIVAVLFNTSEGSLDTLNEWLNVVQSIQIPFALIPLLTLVSREEVMGTFRIGPLVEKVAWTVAVVVILVYGYMLLDFFLSEVKGLVYGFVVMSCAAAWLSFIAYLVKHSGAFSSFFHTSLHSRGFSSLSPN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1393 549 Pfam Natural resistance-associated macrophage protein 108 470 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 85 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 PRINTS Natural resistance-associated macrophage protein signature 196 215 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 PRINTS Natural resistance-associated macrophage protein signature 378 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 PRINTS Natural resistance-associated macrophage protein signature 440 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 PRINTS Natural resistance-associated macrophage protein signature 270 293 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 PRINTS Natural resistance-associated macrophage protein signature 166 192 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 PRINTS Natural resistance-associated macrophage protein signature 406 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 PRINTS Natural resistance-associated macrophage protein signature 221 242 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 70 525 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju11g1393 549 NCBIfam Nramp family divalent metal transporter 92 462 - -
Alju11g1393 549 Hamap Divalent metal cation transporter MntH [mntH]. 68 496 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1393 Alju-ChrAlju11 28618194 28621845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1393 51 527 Inorganic Solute Cotransporters AT1G47240 72.117 0.0 711