Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1375 ATGGAGATAGATCTTGGGCTGTCCACATGTCATCAGGGGGAGCCAGAATTTGGGTCCTTTAGAAATGGTGTGGCCGTTCATGTGGAAGAGCAATGTGCTAAATGTCCAACAGTGACTGAACACTGTAAGGAAGTCTCTTGTGAAAATGCTTTGTTTTGTCAGGAGCAGGTGCATGCTATTAATCAAAATCCTGTAAAGGAGCCTCAGAATGGCTTGGAATTTGAATCAAAGGAGGCAGCTTATTTTTTCTACAGAGAATATGCTCACTCTGTGGGATTCAGTATTACAATAAAAGCCAGTCGGCGCTCAAAAAAGTCTGGTAAGTTTATTGACATTAAAATTGCTTGTTCCAGATTTGGAAGCAAGCGTGAATCTGGTGCAACTGTTAATCCACGACCATGTATGAAAACAAACTGCAAGGCTGGCATGCATTTGAAGAAGAAGCCAGATGGAAAATGGATCGTATATAGTATTGTGAAGGAGCATAACCATGAGATCTGTCCAGATGATTTTCTCAGGGGATGGAACAAACAGCCTAGTGATGTAGCTTTTCAGAAGAAGGGTTTGCAGTTGGCGCTTGATGAGGAAGATGCTCAATTGATGATTGAATACTTTGTGTCCACGCAAAGTAATAATCCCAACTTCTTCTATGCCATAGACCTAGACCATAATAAATGTTTGAGAAATGTGTTTTGGGTTGATTCAAAGGGTCGACTTGATTACCAGAACTTCAGTGATGTTGTTTTTATTGACATTTTTTACTTGCAAAACAAGTATAAAATTCCATTTGTTCCTATTGTGGGAGTCAATCATCACTTTCAGTACATTTTGCTTGGATGTGCTCTGATTGGGGAGGTGACTACTTCTGCTTTTGTATGGCTAATGGAGACATGGCTTAAAGCAATGGGTGGTCTAGCACCAAAAGCAATTATCACAGATCAAGAAAACTTCTTGAAAGAAGCCATTGTAGAAATCTTGCCACGTACACATCATTTTTTCTGTGTATGGCACATCTTAAGAAAAATTACTGAAAATTTGGGTTATATAATAAGTCAAAATAGTAATTTTATGACAAAATTCAGGAAATGTATTCATGACTCTTTGTTTGATGAGCAGTTTGAAAAGCGTTGGCAGAAACTGATCAATAGATTTGAACTAAAGGACAATGGATTGGTTCTATCATTGTTCGATGATCGCAAAAAGTGGGTTCCAACATACATGCAGGATGTGTTTTTGGCTGGAATGTCCACAGCTGAGAGGTCTGAAAGTATAACCTCATACTTTGACAAGTACATTTGTGTTGATTCTACATTTAATGACTTTATTGAACAATATAAAGTTTTCTCTGTAGAGAGATTGGACATGGAAGCCATAGCAGACTTTGAAACTAGGGAAAAGCGGCCTGCATTAAGATCCTTATTATCTTTTGAGAAGCAGCTCGCTGTGATTTATACGGATGCCATTTTCAAAATATTTCAATTGGAGATATTGGGGGTGGTGTCTTGTCAGCTTCGAAAGGAAAGAGAAGACGGCGCCATTGTTACTTTCCAAGTTGAGGATTTTGAAGTAAAAAAGAAATTCATTGTGTCTTGGAAAGAACCAGATTTGAAAGTTTGTTGTTCTTGTCATTTATTTGAATACATGGGTTTTCTATGCAGACACGCAATGCTTATCATGCAGGTGTCTGGTTTAACAAACATTCCATCTCACTATATTTTGAAACGATGGACAAGAAATGCAAAGGTGAATCACTTTGTGGGTATTGATACAAACAGAAGGCTTACTGACAGAGTGCAACGTTTTAATGATATATGTAGGAGGGCTATCAGATTAAGTGAAATTGGGTCTCTGTCTCCAGATACCTACCATGTTGCATTTCAGGCATTGGAGGAAGTTTATAAACACTGTGTGACTGCTAATAATTCTGTAAAAAGCATATCAGAGCCCAAGAGCTCAGTACTTAATGGTGCTGCTGATATCGAAGAGGAGAATCATCTCAATCATACGACCAAGACAACTAAGAAAAGGAGGTCATATAATAAAAGGGGACGCTCTGAATCTGAAAGAACAAACACTAGGACGCTGGATACGTTTCAAAATAGGGAACAAATGAATACAAGAGAACACAACTTTGATAACTGTTGCATTCCTAGACAGGACACAGAACGAGTGAGCTCCACCTCTTGA 2187 0.385 MEIDLGLSTCHQGEPEFGSFRNGVAVHVEEQCAKCPTVTEHCKEVSCENALFCQEQVHAINQNPVKEPQNGLEFESKEAAYFFYREYAHSVGFSITIKASRRSKKSGKFIDIKIACSRFGSKRESGATVNPRPCMKTNCKAGMHLKKKPDGKWIVYSIVKEHNHEICPDDFLRGWNKQPSDVAFQKKGLQLALDEEDAQLMIEYFVSTQSNNPNFFYAIDLDHNKCLRNVFWVDSKGRLDYQNFSDVVFIDIFYLQNKYKIPFVPIVGVNHHFQYILLGCALIGEVTTSAFVWLMETWLKAMGGLAPKAIITDQENFLKEAIVEILPRTHHFFCVWHILRKITENLGYIISQNSNFMTKFRKCIHDSLFDEQFEKRWQKLINRFELKDNGLVLSLFDDRKKWVPTYMQDVFLAGMSTAERSESITSYFDKYICVDSTFNDFIEQYKVFSVERLDMEAIADFETREKRPALRSLLSFEKQLAVIYTDAIFKIFQLEILGVVSCQLRKEREDGAIVTFQVEDFEVKKKFIVSWKEPDLKVCCSCHLFEYMGFLCRHAMLIMQVSGLTNIPSHYILKRWTRNAKVNHFVGIDTNRRLTDRVQRFNDICRRAIRLSEIGSLSPDTYHVAFQALEEVYKHCVTANNSVKSISEPKSSVLNGAADIEEENHLNHTTKTTKKRRSYNKRGRSESERTNTRTLDTFQNREQMNTREHNFDNCCIPRQDTERVSSTS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1375 728 MobiDBLite consensus disorder prediction 668 728 - -
Alju11g1375 728 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 637 IPR031052 GO:0006355
Alju11g1375 728 SMART 26again6 538 565 IPR006564 GO:0008270
Alju11g1375 728 Pfam SWIM zinc finger 537 558 IPR007527 GO:0008270
Alju11g1375 728 MobiDBLite consensus disorder prediction 702 716 - -
Alju11g1375 728 ProSiteProfiles Zinc finger SWIM-type profile. 525 563 IPR007527 GO:0008270
Alju11g1375 728 Pfam FAR1 DNA-binding domain 83 167 IPR004330 -
Alju11g1375 728 Pfam MULE transposase domain 247 340 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1375 Alju-ChrAlju11 27937973 27940520 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju11g1375 MULE 9.6e-23 CL0219