Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1355 ATGGCCGGCCTGGACTTGGGTTCTTCACAATCTCATCACTTTCTTCATCACCATCAGCTTCAACGCCCTAATCTTCAATCCAGCCACGATGATGATGATAACCAAGAAGATAGTACTAACCCTAACGGGGTTAACCCGGCCGGTCCAGGCGATGTTGTTGTTCGCCGGCCTAGGGGTCGGCCGCCGGGTTCAAAGAATAAGCCCAAGCCACCGGTGATTATCACGCGCGAGAGTGCCAACGCGCTCCGAGCTCATATTCTTGAGGTAAGTAGCGGCTCTGATGTGTTTGAGTGTGTGGCGACTTATGCAAGGAGGAGGCAGCGAGGGATCTGTGTGTTGAGTGGGAGCGGCACCGTCACCAACGTGACAATCCGGCAGCCATCGGCGGCTGGGGCTGTCGCGACGCTGCAGGGGCGGTTTGAGATACTGTCACTGTCCGGATCTTTCTTGCCACCTCCGGCTCCGCCCGGTGCGACGAGCCTGAGCGTATTTCTCTCCGGAGGACAAGGTCAGGTGGTCGGAGGAAACGTGGTAGGCGCGTTAGTGGCGGCTGGGCCAATTATTGTGATTGCTTCTTCATTCACCAACGTAGCATATGAGAGATTGCCATTAGATAATGAGGAGGAACCCTTACCGGTCCAGAACGGCGTCAACGGCGGCGGCGAGGATGACGGCCAAGACATGAATGGATTTCCGAACTCATCTTCTGGTCTTCCCTTCTTGAATTTGCCTGTAAACATGTCTCAGTTACCACTTAACGGTAATTGGGTTGAAAATTCTGGTGGAAGATCTCAGCCATATTGA 804 0.541 MAGLDLGSSQSHHFLHHHQLQRPNLQSSHDDDDNQEDSTNPNGVNPAGPGDVVVRRPRGRPPGSKNKPKPPVIITRESANALRAHILEVSSGSDVFECVATYARRRQRGICVLSGSGTVTNVTIRQPSAAGAVATLQGRFEILSLSGSFLPPPAPPGATSLSVFLSGGQGQVVGGNVVGALVAAGPIIVIASSFTNVAYERLPLDNEEEPLPVQNGVNGGGEDDGQDMNGFPNSSSGLPFLNLPVNMSQLPLNGNWVENSGGRSQPY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1355 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 222 IPR014476 GO:0003680
Alju11g1355 267 CDD DUF296 83 166 IPR005175 -
Alju11g1355 267 PIRSF ESCAROLA 2 265 IPR014476 GO:0003680
Alju11g1355 267 FunFam AT-hook motif nuclear-localized protein 82 209 - -
Alju11g1355 267 ProSiteProfiles PPC domain profile profile. 79 217 IPR005175 -
Alju11g1355 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Alju11g1355 267 MobiDBLite consensus disorder prediction 1 73 - -
Alju11g1355 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 211 - -
Alju11g1355 267 Gene3D - 82 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1355 Alju-ChrAlju11 25162262 25163065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1355 53 262 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 71.429 1.48e-87 260