Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1328 ATGGCGGATCGTGACGTATTGGTGAACGGAAAAGGTTCGACACTTACCCTTCGTAGCAATGGAAATCTGGTTTTGAATGATGCAGGTCAGGTCGATGTTTGGGCCACCAACACAACTTCGTTGAAACGTCCAGAATTGATTCTGCAAGATGATGGTAATCTCGTTCTTCTTGAATATCCAAATCATATTGTGTGGCAAAGTTTTGATTTTCCAACTGACACACTTGTCCCTGGACAAAGGCTTACCAGACACTCTAGTCTTGTCTCCTCTAAAAGTCAGACTAACGTCTCTTCTGGTTTTCATGAGTTATTTTTTGACAATGATAATGTTCTTCGTCTTCTCTACAACGGCCCTGATGTCTCGAGTATTTACTGGCCACCTCCATGGAATCTACCACAAAGAAATGGTAGGTCCACCTTCAATGCAAGTCGCTTTGTGTTTCTTGATTCATACGGTGATATCATTTCAACCGATAATTTTACTAGTAAGACATCGGACTATGGCCTAGTGCTTCAGAGACGGTTAACCATTGATAGTGATGGTAATGTCAGAGTGTATAGTCGAAGAAACGGGGAAGAGAAATGGTATATTTCATGGCAAGTTATTTCTGCCGGTTGCAACATTCATGGCATTTGTGGAGAAAATAGTTTCTGCAAATATGAACCTTATATTGGTCGAACATGCCTATGTCTTCCAGGTTACAAGTTCAAGGATGAAAGTGACTCATCACTTGGGTGTGAACCAGACTTCAATTTGTCTTGCAACCCAGAAGATTCTGACTTTCTGTATATACCTAATGGCGATTTCTACGGGTACGACCAAGGTACTTACCCTAACATTACATTTGATGAATGTAAGAAGGAATGTTTAAAGTTATGTAACTGCAACGGTTTTCAATATGCATATGACGATTTTCAGTTTTTATGTTACCCAAAGACCCTCTTGGTCAATGGCAATCTTTCTCCTGCGTTCAAGGGAGGTTTTCACCTGAGACTCCCTAATTCCAGCTCATTCACTTTTAAAGAACCCAATACCCAGTGTGAGCTTACTAAGTCTTTAAAGCTGGAGAGAGTCTATGTCTCAAAACAAGATAGTATCTTAGTGAAGGTGTTACTATGGTTAGTGATAGCAATTGGAGTCTTTGAACTTGCATGCATCTTTCTCTTTTGGTGTCTGACTTGGAAAAAGTCAAGCAACCAGCAGAATTATGATCATCTTACCGGAACTGGGTTTAGAAAATATAGCTATTCAGAGTTGAAAGAAGCAACAAGAGGTTTCAGTGAAGAGATTGGAAGGGGTGCAGGTGGAGTTGTATACAAGGGTGTGCTAAAGGATGGGCGAGTGGCTGCAATCAAGAGACTCAATGAAGCAAACCAAATAGAAAGTGAGTTTCTTGCTGAAGTCAACTTAATAGGAAGGCTCAACCACATGAACTTGATTGACATGTGGGGTTATTGTGCAGAGGGAAAGTACAGAATGTTGATATATGAGTACATGGAAAACGGTTCTTTAGCAGAAAATCTGGAATCCAACAAGTCATCGCTTGATTGGAGAAAGAGGTATGAAGTCGCTCTGGAAACAGCAAGAGGACTTGCATATCTTCACGAAGAATGCTTGGAGTGGGTTCTTCATTGTGACATAAAGCCTCAAAACATGCTTTTGGATTCTGATTATAAGCCCAAGGTTGCAGATTTTGGATTGTCAAAGTTGCAGAACAGAAACGAGCTCAACAATCCAAGCTTCTCAAGGATCAGAGGTACAAGAGGATATATGGCCCCAGAGTGGGTTTTCAACTTACCAATAACATCTAAGGTTGATGTCTACAGCTATGGAATTGTGGTGTTGGAGATGATAACAGGAAAAAGCTTGAGGGTAGATGGACCAGATCACTCACATCATGGGAGGCTAGTGACATGGGTGAGGGAGAAGAAGAACAAAGGAGAAGGAAAAGCATCATGGGTGGAACAAATCATTGATCCAATCGTTGAGGGAAGCTTTGACATGAAGACAATGGAGGTTTTGGTTACAGTAGCATTGCAGTGTGTCGTGGAAGACAAGGATGCAAGACCTTCGATGAGTCGCATAGTGGAGATGCTTCAAAGTCATGAGATTGAGTATTGA 2121 0.4125 MADRDVLVNGKGSTLTLRSNGNLVLNDAGQVDVWATNTTSLKRPELILQDDGNLVLLEYPNHIVWQSFDFPTDTLVPGQRLTRHSSLVSSKSQTNVSSGFHELFFDNDNVLRLLYNGPDVSSIYWPPPWNLPQRNGRSTFNASRFVFLDSYGDIISTDNFTSKTSDYGLVLQRRLTIDSDGNVRVYSRRNGEEKWYISWQVISAGCNIHGICGENSFCKYEPYIGRTCLCLPGYKFKDESDSSLGCEPDFNLSCNPEDSDFLYIPNGDFYGYDQGTYPNITFDECKKECLKLCNCNGFQYAYDDFQFLCYPKTLLVNGNLSPAFKGGFHLRLPNSSSFTFKEPNTQCELTKSLKLERVYVSKQDSILVKVLLWLVIAIGVFELACIFLFWCLTWKKSSNQQNYDHLTGTGFRKYSYSELKEATRGFSEEIGRGAGGVVYKGVLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLIYEYMENGSLAENLESNKSSLDWRKRYEVALETARGLAYLHEECLEWVLHCDIKPQNMLLDSDYKPKVADFGLSKLQNRNELNNPSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSLRVDGPDHSHHGRLVTWVREKKNKGEGKASWVEQIIDPIVEGSFDMKTMEVLVTVALQCVVEDKDARPSMSRIVEMLQSHEIEY 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1328 706 Gene3D Phosphorylase Kinase; domain 1 390 498 - -
Alju11g1328 706 CDD PAN_AP_plant 250 333 - -
Alju11g1328 706 ProSiteProfiles Bulb-type lectin domain profile. 1 69 IPR001480 -
Alju11g1328 706 ProSiteProfiles PAN/Apple domain profile. 254 335 IPR003609 -
Alju11g1328 706 Gene3D Transferase(Phosphotransferase) domain 1 499 705 - -
Alju11g1328 706 CDD B_lectin 9 71 IPR001480 -
Alju11g1328 706 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Alju11g1328 706 SMART serkin_6 424 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1328 706 PIRSF SRK 1 705 IPR024171 GO:0004674
Alju11g1328 706 PANTHER OS07G0415500 PROTEIN 4 701 - -
Alju11g1328 706 SUPERFAMILY Protein kinase-like (PK-like) 402 700 IPR011009 -
Alju11g1328 706 Pfam Protein kinase domain 427 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1328 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Alju11g1328 706 Pfam D-mannose binding lectin 2 86 IPR001480 -
Alju11g1328 706 SMART blect_4 1 71 IPR001480 -
Alju11g1328 706 CDD STKc_IRAK 430 700 - -
Alju11g1328 706 ProSiteProfiles Protein kinase domain profile. 424 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1328 706 FunFam S-receptor-like serine/threonine-protein kinase 393 498 - -
Alju11g1328 706 Gene3D - 1 126 IPR036426 -
Alju11g1328 706 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 87 IPR036426 -
Alju11g1328 706 FunFam Putative receptor-like protein kinase 499 705 - -
Alju11g1328 706 Pfam S-locus glycoprotein domain 172 236 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1328 Alju-ChrAlju11 21976258 21978378 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1328 361 700 Receptor kinase-like Gene Family AT5G45780 35.613 6.47e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju11g1328 Pkinase 2.7e-51 CL0016