Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1326 ATGGCGTTTCTGAGTTCTTCCATATCGATAGTTCTCTTCGCCTTGGCTTGGCTTTTCCTGTGTTCGTCATCTACTTCGGGTAATTCGTTATCTCTGTCGGTGGAGAATCCAAAACATGTTATCAAATCAGCAAACAACAATTTCACAGCTGGGTTCTCTTGTGTCGGTGAGAACGCTTTTGTTTTCGCTATATGGTTCACTGAACCTCAAAGCCAAAACTTGACTGTCATTTGGATGGCAAATCGTGATGTATTGGTGAATGGAAAAGGCTCAAAGCTTACCCTTCGCAGAAATGGAAATTTGGTCTTGAACGATGCAGGTCAGGTCGAAGTTTGGGCTACAAACACAACTTCGTTGAAACGTACAGAATTGATTCTACAAGATGATGGTAATCTCATTCTTCTTGAGTATCCAAATAATATTTTGTGGCAAAGTTTTCATTTTCCAACAGATACACTTGTTCCTGGACAGAGTCTCACCAGATACGCTAGCCTTGTCCCTCTAAAAGTCAGACTAACTTCTCTTCTGGTTTTCATAAGTTATTTTTTGACAATGATAATGTTCTTCGTCTTCTCTACGATGGCCCTGAGGTTTCGAGTATTTTACTGGCCACCTCCCTGGTTTAAACCGGAACAAGTTGGTAGGTCCACCTTCAATGCAAGTCGCTTTGTGTTCCTCGATTCGCATGGGGAGATCATTTCAAGTGATAATTTTTCTAATGAGACATCAGACAATGGCCTTGTACTTCAAAGACGATTAACAATTGATATTGATGGTAATCTTAGGGTCTATAGTCGAAGAAATTGGGAAGATAAATGGAAAGTTTCATGGCAAGCTTTTTCTGCAGGTTGCAACATTCATGGCATTTGGGGAGAAAATAGTTTCTGCAAATATGAACCTTTTACTGGTCGAACATGCATATGTCCTCCAGGTTACAGGTTCAAGGATGAAACCGACAGGTCACTTGGGTGTGAACCAAAGTTCAATTTGTCTTGCGACAGCCATGATTCTAACTTTTTATATATACCTAATGGAGATTTCTACGGGTACGACCATGGAACTTACCTTAACATTACATTTGATGATTGTAAAAATCATTGTTTGACGTTATGCACTTGCAAAGTGGTGGCGATTGGAGTCCTTGAACTTGCATGCATCTTTCTCTTTTGGTGTTTGACATGGAATAAGTCTAGTAAGCAGCAGAATTATGATAATCTTACTGGAACTGCGTTTAGAAAATATAGCTACTCAGAGTTGAAAGAGGCAACAAGTGGTTTCAGCGCAGGGATTGGAAGAGGAGCTGGAGGAACTGTGTACAAGGGTGTGCTAAAAGATGGGCGAGTAGCTGCAATCAAGAGACTGAACGAAGCAAACCAAATAGAAAGTGAGTTTCTTGCTGAAGTCAACTTAATAGGAAGGCTTAACCACATGAACTTAATTGACATGTGGGGGTATTGTGCAGAAGGAAAGTACAGAATGTTGGTGAATGTGTAA 1494 0.4043 MAFLSSSISIVLFALAWLFLCSSSTSGNSLSLSVENPKHVIKSANNNFTAGFSCVGENAFVFAIWFTEPQSQNLTVIWMANRDVLVNGKGSKLTLRRNGNLVLNDAGQVEVWATNTTSLKRTELILQDDGNLILLEYPNNILWQSFHFPTDTLVPGQSLTRYASLVPLKVRLTSLLVFISYFLTMIMFFVFSTMALRFRVFYWPPPWFKPEQVGRSTFNASRFVFLDSHGEIISSDNFSNETSDNGLVLQRRLTIDIDGNLRVYSRRNWEDKWKVSWQAFSAGCNIHGIWGENSFCKYEPFTGRTCICPPGYRFKDETDRSLGCEPKFNLSCDSHDSNFLYIPNGDFYGYDHGTYLNITFDDCKNHCLTLCTCKVVAIGVLELACIFLFWCLTWNKSSKQQNYDNLTGTAFRKYSYSELKEATSGFSAGIGRGAGGTVYKGVLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLVNV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1326 497 Gene3D - 25 147 IPR036426 -
Alju11g1326 497 Pfam D-mannose binding lectin 75 161 IPR001480 -
Alju11g1326 497 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Alju11g1326 497 SUPERFAMILY Protein kinase-like (PK-like) 402 495 IPR011009 -
Alju11g1326 497 PANTHER OS07G0415500 PROTEIN 5 377 - -
Alju11g1326 497 SMART blect_4 23 149 IPR001480 -
Alju11g1326 497 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 161 IPR036426 -
Alju11g1326 497 CDD B_lectin 43 149 IPR001480 -
Alju11g1326 497 ProSiteProfiles Protein kinase domain profile. 424 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1326 497 Pfam Protein kinase domain 429 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1326 497 FunFam S-receptor-like serine/threonine-protein kinase 393 496 - -
Alju11g1326 497 Gene3D Phosphorylase Kinase; domain 1 390 496 - -
Alju11g1326 497 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1326 Alju-ChrAlju11 21870446 21872171 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1326 405 495 Receptor kinase-like Gene Family AT5G01950 48.936 7.28e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju11g1326 B_lectin 1.9e-20 No_clan