Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1260 ATGGCTCGTCGCCAAACCGACTCAGGTTTTGGTCGATTTGCTCTTATGATCCTTTTCTTGATGGGCGCGATCTCCTGCTTCACGGTGTACCTTTTCATTATCGTGGTGTTCAAACCCAGCAGTACCGAAAATTCTTCAGTGCAAGAATGGGTTGAAGAAGATTTGGGGAGTAAAGAAGAGGAATGTTGTAGAGGAATTGAGCATATGGAGCTCTGGGGTGATGCTGTTAAATGGGGTACAGAATTTAGGTTTAATTCTTCGGATGACTGTTGCAAGGCTTGTAAGGCTATGTGCAGGGATGATGAGCCTTGTTTATGTAATTCTTGGGTATTTTGTGGAGATAGAAAAGCCTGTGGACCTAGATTCGGCGAGTGTTGGTTAAAAAGACAGAAGGATGTTTTAAGCCCTGATCGACGAGAATCAGGTGATCTAGTTATGTGGACTTCTGGGCTTGTCTTTGGGAAGAGAGAGGGGATTGTTGGTCTGGAAACAGAACACGGAATTCTTCGTATAAGACTTTTGCCTGATTGCTCTCCACAGTCCGTTGCCTACATTCTTGAGCTGTTGGCATTGAAACATTGTGCTGGATGCCACTTTTACCGTGCTGAAAGCCGAGGAAGATTTTGGGACTCAGATGGAAACCACCAAAAATATGCTTCATTTGGTCCTCCTTTTGCACTAATCCAAGGAACATTTGAAGCTCAAGGGTCTATATTCAGGGATATTCCAAGAGAATCCTGTCCTTCCATAAGAAGGGGATCTGTTGCATGGGTTGATTCTGGTCCGGAGTTCTTCATCAGCCTAGCTAATCACAATGAGTGGAAGAAGCAATATACTGTGTTTGGTTATGTTCTATCTGAAGATATGGCAGTTTTGGAGAAAATATCTCAGCTTCCTACGAAGCCAGAGGTTTGGAGTAACATTACTGTCTCTGTTTTGGAGAAGCCTGTTCCAATACGACTCCAAAGAATGAATACAAAATCATGA 987 0.4336 MARRQTDSGFGRFALMILFLMGAISCFTVYLFIIVVFKPSSTENSSVQEWVEEDLGSKEEECCRGIEHMELWGDAVKWGTEFRFNSSDDCCKACKAMCRDDEPCLCNSWVFCGDRKACGPRFGECWLKRQKDVLSPDRRESGDLVMWTSGLVFGKREGIVGLETEHGILRIRLLPDCSPQSVAYILELLALKHCAGCHFYRAESRGRFWDSDGNHQKYASFGPPFALIQGTFEAQGSIFRDIPRESCPSIRRGSVAWVDSGPEFFISLANHNEWKKQYTVFGYVLSEDMAVLEKISQLPTKPEVWSNITVSVLEKPVPIRLQRMNTKS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1260 328 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 160 310 IPR002130 GO:0000413|GO:0003755
Alju11g1260 328 Gene3D Hepatocyte Growth Factor 68 152 - -
Alju11g1260 328 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Alju11g1260 328 SUPERFAMILY Cyclophilin-like 156 305 IPR029000 -
Alju11g1260 328 Gene3D - 153 316 IPR029000 -
Alju11g1260 328 PANTHER EXPRESSED PROTEIN 1 327 - -
Alju11g1260 328 FunFam Predicted protein 155 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1260 Alju-ChrAlju11 18580875 18596173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1260 155 299 U-box Gene Family AT5G67530 26.667 2.88e-06 47.0