Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1238 ATGACAATCATTATTTCAATTGCTCTGCTTTCTTTCCTCTCTCACTTTATCATTCTCACTACTGCACACCAAGGCTTCATATATCATTTGTGTTACAATAGTGTTGGTAACTACACAAACATGAGTGCCTATGGCACAAACCTTAAAACTCTTCTTTCTAATCTCACCTCCGACCCAAAAATTGACTATGGCTATTACAGTTCTTCTGAAGGCCAAAACCCTAATAGAGTTAACGCTCTTGGACTGTGTAGGCCAGATGTTAAGCCAGATTCTTGTCGTACTTACCTCAACAATGCCTCAATCCTTCTACGAAATCTTTGTCCAAATCAGAAGGAAGCGTATGGATATAATGACGGATGCATTTTACGATACGCCAATCGCTCCATGTTTGGGATAAATCAAGATCCAGATTTTTCAATCTTGATGTGTAACCCTAATAATGTAACAGACAATAAGTACAGTGAAGTGCTTGATGGACTACTGCGAAGGCTTAGAAGCAAAGCTGCCTCCGGGGATAGTCGCCGGAAGTTCGCCGTCAACACTGCGACGACTTTGTTTCAAACCATACATGGTCTTGTTCAGTGCATGCCTGATTTGTCTGAGCAAGATTGTGACGATTGCTTGGAGAAGGCGATATCGAGCATTCCCAGGTTCTGTAACAAGGGGATTGGCGGGAAGATTATCAAACTGAGTTGCAATATTAGATATGAGAATTATCGCTTCTATGATACTGCAGTTGTCGACTCATTATTATCTCCATCTCCTCCTGCTGCTTCACCACCATCCAACTCATCTTCCTTACAAGGGAATCACAACACATCAAGAACAGTCATTATCGTTGCTGCGTCCATTGTAGCTTTTATCGCAATTCTTACTTTGGTCTGCATCTATTTTGTCGTCCGGAAATCGAAGAGAACCATTGAAATTGATCAACCTGAAGCAAAGGATGATGATGAAATTACACCAATCGAGTCGCTGCAATTCAATTTTAACACCATAAGACTCGCCACAGATAACTTCTCTATTGCAAATAAGCTTGGACAAGGAGGGTTTGGCTCAGTATACAAGGACATTGCTGTCAAAAGAATTGTTGGAACTTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTCTCTGTCAAATCAGATGTTTTTAGTTTCGGCATATTGGTTCTAGAGATCTTAAGTGGCAAAAAGAACAGCAATGTCTTCGTCGATGAAGAGAACCCTGATCTATTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACGCCCTTCAATTTAGTAGATCCAATTTTAAACAATGGTTCAAGAAATGAAATAATAAGATGCATCCACATTGGGTTATTATGTGTTCAAGAAAATGTGGCTGACAGGCCAACCATGGCTCAAGTTGTGTTTATGCTCAATAGCTACTCTTCCTCTCTCCCTTTACCTTCGAAGCCTCTGCTTTTCATGAATACCAATGGTTCATCTGAGATACATATGAGAGAGTACAGCTCAGAGGCAACAACAAGATCAAGTGAAGGGGCAAGTAACTCTATTCAAGAATCAGTAAATGAGGCCTCAATTACTGAACTATATCCGCGTTAG 1599 0.4059 MTIIISIALLSFLSHFIILTTAHQGFIYHLCYNSVGNYTNMSAYGTNLKTLLSNLTSDPKIDYGYYSSSEGQNPNRVNALGLCRPDVKPDSCRTYLNNASILLRNLCPNQKEAYGYNDGCILRYANRSMFGINQDPDFSILMCNPNNVTDNKYSEVLDGLLRRLRSKAASGDSRRKFAVNTATTLFQTIHGLVQCMPDLSEQDCDDCLEKAISSIPRFCNKGIGGKIIKLSCNIRYENYRFYDTAVVDSLLSPSPPAASPPSNSSSLQGNHNTSRTVIIVAASIVAFIAILTLVCIYFVVRKSKRTIEIDQPEAKDDDEITPIESLQFNFNTIRLATDNFSIANKLGQGGFGSVYKDIAVKRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEILSGKKNSNVFVDEENPDLLSFAWKNWREGTPFNLVDPILNNGSRNEIIRCIHIGLLCVQENVADRPTMAQVVFMLNSYSSSLPLPSKPLLFMNTNGSSEIHMREYSSEATTRSSEGASNSIQESVNEASITELYPR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1238 532 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Alju11g1238 532 Pfam Salt stress response/antifungal 143 239 IPR002902 -
Alju11g1238 532 MobiDBLite consensus disorder prediction 502 532 - -
Alju11g1238 532 FunFam Cysteine-rich receptor-like protein kinase 10 138 241 - -
Alju11g1238 532 Gene3D - 136 241 IPR038408 -
Alju11g1238 532 Gene3D - 23 129 IPR038408 -
Alju11g1238 532 SUPERFAMILY Protein kinase-like (PK-like) 320 362 IPR011009 -
Alju11g1238 532 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Alju11g1238 532 ProSiteProfiles Gnk2-homologous domain profile. 135 241 IPR002902 -
Alju11g1238 532 MobiDBLite consensus disorder prediction 502 525 - -
Alju11g1238 532 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 354 476 - -
Alju11g1238 532 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Alju11g1238 532 Gene3D Transferase(Phosphotransferase) domain 1 334 479 - -
Alju11g1238 532 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 362 - -
Alju11g1238 532 Pfam Protein tyrosine and serine/threonine kinase 368 468 IPR001245 GO:0004672|GO:0006468
Alju11g1238 532 SUPERFAMILY Protein kinase-like (PK-like) 361 501 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1238 Alju-ChrAlju11 17813253 17822730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1238 351 532 Receptor kinase-like Gene Family AT4G05200 45.902 5.09e-48 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju11g1238 PK_Tyr_Ser-Thr 2.1e-08 CL0016