Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1237 ATGTCTCCTACAGAAGGGAAACACAACGCATCAAGAACAGTTATTATCGTGGCTGCGTCCATTGGAGCTTTTATGGCAATTCTTATTTGGGTCTGCATCTATTTTGTGGTTCGAAAATCGAAGAGAACCATTGAAATTGATCAACCTGAAGCAAAGGATGATGATGAAATTACACCAATCGAGTCACTGCAATTCAATTTTAACACTATAAGACTCGCCACAAATAACTTCTCTATTGCAAATAAGCTTGGACAAGGAGGGTTTGGATCAGTATACAAGGGTAGGCTCCAAAATGGTCAGGACATTGCTGTTAAAAGGTTGTCCATGGATTCTGGGCAAGGAGATTTAGAATTTAAAAATGAAGTGCTATTGGTGGCTAAGCTCCAACATCGCAATTTAGTGAGATTGCTTGGCTTCTCCATGGAAAAAAAAGAAAGATTGTTGATCTACGAGTTTCTTCCTAACAAGAGTCTTGATTACTTATTGTTTGACTCAATCCAACGTGTTCATCTGAACTGGGTAATGCGCTACAAAATTATAGGAGGCATTGCTCGTGGCCTTCTTTATCTTCATGAAGATTCAAGATTGCGTATTATTCATCGAGATCTCAAAGCAAGTAATATTCTTTTAGATGAAGAGTTAAATCCTAAAATATCAGACTTTGGCATGGCAAGATTATTTGTTATGGACCAAACTCAAAGCAATACTAGTAGAATTGTTGAAACTTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTCTCTGTCAAATCAGATGTTTTTAGTTTCGGCATATTGGTTCTAGAGATCTTAAGTGGCAAAAAGAACAGCAATGTCTTCGTCGATGAAGAGAACCCTGATCTATTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACAGCCTTCAATTTAGTAGATCCAATTTTAAACAATGGTTCAAGAAATGAAATAATTAGATGCATCCACATTGGGTTATTATGTGTTCAAGAAAATGTGGCTGACAGGCCAACCATGGCTCAAGTTGTGCTTATGCTCAATAGCTACTCTTCCTCTCTCCCTTTACCTTCGAAGCCTCTGCTTTTCATGAATACCAATGGTTCATCTGAGATACAGATGAGAGCGTACAGCTCAGAGGCAACAACAAGATCAAGTGAAGGGGCAAGTCACTTTATTCATGAATCAGTAAATGAGGCCTCAATTACTGAACTATATCCGCGTTAG 1227 0.3839 MSPTEGKHNASRTVIIVAASIGAFMAILIWVCIYFVVRKSKRTIEIDQPEAKDDDEITPIESLQFNFNTIRLATNNFSIANKLGQGGFGSVYKGRLQNGQDIAVKRLSMDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFSMEKKERLLIYEFLPNKSLDYLLFDSIQRVHLNWVMRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMARLFVMDQTQSNTSRIVETYGYMAPEYAMHGQFSVKSDVFSFGILVLEILSGKKNSNVFVDEENPDLLSFAWKNWREGTAFNLVDPILNNGSRNEIIRCIHIGLLCVQENVADRPTMAQVVLMLNSYSSSLPLPSKPLLFMNTNGSSEIQMRAYSSEATTRSSEGASHFIHESVNEASITELYPR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1237 408 CDD STKc_IRAK 83 348 - -
Alju11g1237 408 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 371 - -
Alju11g1237 408 FunFam cysteine-rich receptor-like protein kinase 10 153 354 - -
Alju11g1237 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Alju11g1237 408 ProSiteProfiles Protein kinase domain profile. 77 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1237 408 Gene3D Phosphorylase Kinase; domain 1 38 152 - -
Alju11g1237 408 FunFam Cysteine-rich receptor-like protein kinase 10 38 152 - -
Alju11g1237 408 Gene3D Transferase(Phosphotransferase) domain 1 153 355 - -
Alju11g1237 408 SUPERFAMILY Protein kinase-like (PK-like) 62 374 IPR011009 -
Alju11g1237 408 Pfam Protein tyrosine and serine/threonine kinase 79 345 IPR001245 GO:0004672|GO:0006468
Alju11g1237 408 SMART serkin_6 77 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g1237 408 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1237 Alju-ChrAlju11 17793526 17798051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1237 2 360 Receptor kinase-like Gene Family AT4G23230 58.333 1.39e-151 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju11g1237 PK_Tyr_Ser-Thr 1.9e-45 CL0016