Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1233 ATGGAAGGAGAGAGAGGCGTTCCGAATAATTATGAACTTCAGGTTTCCTTCGCAAACCCTCATCATCATCATCATCATCCTCATCATCAAGCAGCCATCCACGAAATGGGTTTTGTTCAATTCGAAGAGAATCAAGTCCTCAGCTTCTTAGCACCTTCTGCTCAGTCTCAGTCTTCTTCCTGCGGCGGCAGCAGCGCGGCGGCGGCTGCCCCTTCCTCAGCACCAGCCACAAACGGAGGAGGAGGAGCCGCCGGCGCAGTCGCCACTTCGGTCGGGTTTAGCCATAATGACCTTGTTAATACCAGATCAACTCCATGGAACACCGACCAGGTGGGAACTCTGGATCCCAAGGCTGTCAATGATGAAAACTGCACTGGAAATGCTAGTGACGGCAACAATACATGGTGGAGGAACACAGCATCAGAGAAAAGCAAAGTGAAGGTGAGGAGGAAGCTGAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTGGATGTTCTTGATGATGGCTACAAATGGAGGAAATATGGCCAAAAAGTTGTCAAAAATAGCCTCCATCCAAGAAGCTACTACCGTTGCACCCATAGCAATTGCAGAGTGAAGAAGAGGGTTGAACGACTATCAGAGGATTGTCGTATGGTGATAACAACTTATGAAGGAAGGCACAACCACTCTCCTTGCGACGACTCAAATTCATCTGAACATGAATGCTTCACCTCTTTCTAA 729 0.4801 MEGERGVPNNYELQVSFANPHHHHHHPHHQAAIHEMGFVQFEENQVLSFLAPSAQSQSSSCGGSSAAAAAPSSAPATNGGGGAAGAVATSVGFSHNDLVNTRSTPWNTDQVGTLDPKAVNDENCTGNASDGNNTWWRNTASEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1233 242 ProSiteProfiles WRKY domain profile. 163 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1233 242 Gene3D WRKY domain 155 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g1233 242 SMART WRKY_cls 168 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1233 242 Pfam WRKY DNA -binding domain 169 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju11g1233 242 SUPERFAMILY WRKY DNA-binding domain 160 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju11g1233 242 FunFam WRKY transcription factor 57 154 228 - -
Alju11g1233 242 MobiDBLite consensus disorder prediction 100 136 - -
Alju11g1233 242 MobiDBLite consensus disorder prediction 58 72 - -
Alju11g1233 242 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 229 IPR044810 GO:0003700
Alju11g1233 242 MobiDBLite consensus disorder prediction 58 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1233 Alju-ChrAlju11 17574912 17582408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1233 112 242 WRKY Transcription Factor Family AT2G44745 73.188 1.01e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju11g1233 WRKY 1.6e-24 CL0274