Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g1186 ATGGCCCGCTTTTCGAGGTCATCCACACATCGGCTTCTCTACACTCTCTGCGTTTCCCCTGCTAAGTCGGTGGCTTCACCGTCGTCCGCCGCCTCTCTCCTCTCCGGCACCTTCCACCTCCGCCATTTCTCCGCGGGGAACCTTGCGCGGGCCAAAGATGATAAGGAGCCATGGTGGAAGGAGTCGATGGAAAGGCTTCGTAACATTGGTATCTCGGCGCATATTGACTCCGGCAAGACCACGCTGACGGAAAGGATTCTGTTCTACACAGGGCGAATCCATGAGATTCATGAAGTTAGAGGTAAGGACGGAGTGGGTGCCAAGATGGATTCTATGGATTTGGAGAGGGAGAAGGGGATCACTATTCAGTCGGCAGCTACCTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGATACGCCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGCTTTGCGTGTTCTTGATGGTGCTATTCTTGTCCTATGTAGTGTTGGGGGAGTGCAAAGTCAGTCTATTACTGTCGATCGGCAAATGAGAAGATATGAAGTCCCAAGGCTTGCATTTATCAATAAACTAGATCGGATGGGAGCAGATCCTTGGAAAGTTTTGAATCAGGCAAGGTCTAAACTTCGGCATCACAGTGCTGCAGTGCAAGTTCCTATAGGCTTGGAAGAAGATTTCAAGGGTCTCGTTGATCTTGTGCAATTGAAGGCCTACTATTTTCATGGCTCCAATGGTGAAAAAGTTGTTGCTGAGGATGTATCTGCAGATATGGAGGCCATGGTTGCAGAAAAAAGACGAGAGCTTATAGAAGTTGTGTCAGAAGTTGATGATAAACTTGCTGAAGCATTTCTCAATGATGACCCCATATCATCTGCTGATCTTGAGGAAGCAATTCGTAGAGCTACTGTAGCACGAAAATTTATACCAGTATTCATGGGCAGTGCCTTCAAAAACAAGGGGGTTCAGCCACTTCTGGATGGTGTACTTCAGTATTTGCCGTGTCCAGCTGAAGTTAGTAATTATGCCCTTGACCAGACAAAGAAAGAGGAGAAGGTTGTGTTGTCTGGAACACCTGATGGGCCCCTTGTGGCATTAGCTTTCAAATTGGAGGAAGGGCGATTTGGTCAGTTAACATATTTAAGAATCTATGAAGGTGTCATTCGGAAGGGGGAATTTATTATTAACATAAATACTGGCAAGAAGCTTAAGGTTCCTCGCTTGGTTCGGATGCATTCAGATGAGATGGAGGATATTCAAGAGGCTCATGCTGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACTTTTACTGATGGGTCAGTCAAATACACAATGACTTCTATGAATGTACCTGAGCCAGTGATGTCATTGGCTGTGCAACCCATTTCAAAAGATTCCGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAGAGAGAGGATCCTACTTTCCGCGTTGGCTTGGACCCAGAGAGTGGGCAGACGATCATTTCGGGAATGGGGGAATTGCATTTAGAAGTCTATGTTGAACGCATTAGGAGAGAGTACAAGGTTGATGCTACTGTTGGAAAGCCTCGTGTTAATTTTAGAGAGACTGTTACTCAACGTGCCAACTTTGATTATTTACATAAAAAGCAATCTGGAGGACAAGGTCAATATGGTCGAGTAATTGGCTATATTGAACCACTTCCTGCAGGGTCCCCAACTAAGTTTGAATTTGAAAACTTGCTTGTTGGGCAGGCTGTACCATCCAATTTTATCCCGGCAATTGAGAAGGGTTTCAGAGAAGCTGCAAACTCGGGTTCTTTAATTGGACATCCGGTTGAAAATCTTCGGGTTGTCTTGACAGATGGTGCTGCTCATGCTGTTGATTCCAGTGAACTTGCATTTAAGTTAGCTTCTATCTATGCTTTTAGACAGTGCTATGCTGCTTCCAGACCTGTTATATTAGAACCTATTATGCTTGTCGAGCTGAAAGTACCAACAGAATTTCAGGGGGCTGTTGCTGGTGACATCAACAAGAGAAAAGGTGTAATTGTTGGAAATGACCAGGACGGAGATGATTCGGTTATTACTGCTCATGTTCCTCTTAACAACATGTTTGGATACTCCACATCACTTCGATCAATGACACAGGGTAAAGGGGAATTCACTATGGAGTACAAGGAGCATTCGCCAGTCTCCCATGATGTACAGACGCAATTGATAAACAACTACAAAAGCACCAAGGGAACTGAATAG 2268 0.448 MARFSRSSTHRLLYTLCVSPAKSVASPSSAASLLSGTFHLRHFSAGNLARAKDDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGKDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAVQVPIGLEEDFKGLVDLVQLKAYYFHGSNGEKVVAEDVSADMEAMVAEKRRELIEVVSEVDDKLAEAFLNDDPISSADLEEAIRRATVARKFIPVFMGSAFKNKGVQPLLDGVLQYLPCPAEVSNYALDQTKKEEKVVLSGTPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIININTGKKLKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPISKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLEVYVERIRREYKVDATVGKPRVNFRETVTQRANFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAVPSNFIPAIEKGFREAANSGSLIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYAASRPVILEPIMLVELKVPTEFQGAVAGDINKRKGVIVGNDQDGDDSVITAHVPLNNMFGYSTSLRSMTQGKGEFTMEYKEHSPVSHDVQTQLINNYKSTKGTE 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g1186 755 Gene3D Elongation Factor G (Translational Gtpase), domain 3 466 539 - -
Alju11g1186 755 PRINTS GTP-binding elongation factor signature 137 147 IPR000795 GO:0003924|GO:0005525
Alju11g1186 755 PRINTS GTP-binding elongation factor signature 153 164 IPR000795 GO:0003924|GO:0005525
Alju11g1186 755 PRINTS GTP-binding elongation factor signature 189 198 IPR000795 GO:0003924|GO:0005525
Alju11g1186 755 PRINTS GTP-binding elongation factor signature 68 81 IPR000795 GO:0003924|GO:0005525
Alju11g1186 755 PRINTS GTP-binding elongation factor signature 117 125 IPR000795 GO:0003924|GO:0005525
Alju11g1186 755 Gene3D Translation factors 348 465 - -
Alju11g1186 755 CDD mtEFG1_C 660 737 IPR035649 -
Alju11g1186 755 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 110 125 IPR031157 -
Alju11g1186 755 FunFam Elongation factor G 463 539 - -
Alju11g1186 755 Pfam Elongation factor Tu GTP binding domain 65 338 IPR000795 GO:0003924|GO:0005525
Alju11g1186 755 CDD EFG_mtEFG1_IV 538 653 IPR005517 GO:0005525
Alju11g1186 755 SUPERFAMILY Translation proteins 305 457 IPR009000 -
Alju11g1186 755 Pfam Elongation factor G, domain IV 534 654 IPR005517 GO:0005525
Alju11g1186 755 CDD EFG_III 460 535 IPR009022 -
Alju11g1186 755 NCBIfam small GTP-binding protein domain 66 238 IPR005225 GO:0005525
Alju11g1186 755 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 4 747 - -
Alju11g1186 755 FunFam Elongation factor G 661 731 - -
Alju11g1186 755 FunFam Elongation factor G, mitochondrial 349 462 - -
Alju11g1186 755 Gene3D - 661 731 - -
Alju11g1186 755 CDD EF-G 68 340 - -
Alju11g1186 755 Pfam Elongation factor G C-terminus 658 743 IPR000640 -
Alju11g1186 755 Gene3D - 540 745 IPR014721 -
Alju11g1186 755 Gene3D - 59 344 IPR027417 -
Alju11g1186 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 338 IPR027417 -
Alju11g1186 755 SUPERFAMILY EF-G C-terminal domain-like 457 534 IPR035647 -
Alju11g1186 755 NCBIfam elongation factor G 62 749 IPR004540 GO:0003746|GO:0005525|GO:0006414
Alju11g1186 755 SMART EFG_IV_2 535 655 IPR005517 GO:0005525
Alju11g1186 755 Pfam Elongation factor Tu domain 2 380 446 IPR004161 GO:0005525
Alju11g1186 755 CDD mtEFG1_II_like 367 447 - -
Alju11g1186 755 Hamap Elongation factor G [fusA]. 62 748 IPR004540 GO:0003746|GO:0005525|GO:0006414
Alju11g1186 755 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 64 342 IPR000795 GO:0003924|GO:0005525
Alju11g1186 755 SMART EFG_C_a 657 744 IPR000640 -
Alju11g1186 755 SUPERFAMILY Ribosomal protein S5 domain 2-like 534 656 IPR020568 -
Alju11g1186 755 FunFam Elongation factor G, mitochondrial 57 344 - -
Alju11g1186 755 Pfam Elongation Factor G, domain III 459 533 IPR041095 -
Alju11g1186 755 SUPERFAMILY EF-G C-terminal domain-like 657 749 IPR035647 -
Alju11g1186 755 FunFam Elongation factor G 540 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g1186 Alju-ChrAlju11 15969288 15990686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g1186 43 724 Eukaryotic Initiation Factors Gene Family AT1G56070 23.558 1.16e-33 136